Gene Smal_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4001 
Symbol 
ID6474895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4521594 
End bp4522010 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content70% 
IMG OID642733214 
Producthypothetical protein 
Protein accessionYP_002030383 
Protein GI194367773 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.105567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACCCG GCGACAATGC CGGCATGAGC CGAAAACCCG CCGATCCCTG TCCCTGCGGC 
CTGCCCGCCG ACTACGCCGC CTGCTGCGGC CGTTTCCATG CTGGCGACGC GGCGCCTGAT
GCCGAGCGCC TGATGCGTTC GCGTTACAGC GCCTACGTGC GCGGTTTGGC CGACTACCTG
CGCCAGACCT GGCACCCGGA CACGCGTCCG GCCGAGCTGA CGCTGGACGA TGCGCCGGGC
CAGCGCACGC ATTGGCTGGG CCTGACCGTG CACGAGCACA CCATTACCGG TGCCGACAGC
GCCGACGTCC GCTTCACCGC GCGCTACCGC ATCGGCGGCG GCAGCGCGGT GAAGATGACC
GAACACAGCC GCTTCCAGCG CATCGAAGGC CGCTGGTACT ACCTCGACGC GGTCTGA
 
Protein sequence
MQPGDNAGMS RKPADPCPCG LPADYAACCG RFHAGDAAPD AERLMRSRYS AYVRGLADYL 
RQTWHPDTRP AELTLDDAPG QRTHWLGLTV HEHTITGADS ADVRFTARYR IGGGSAVKMT
EHSRFQRIEG RWYYLDAV