Gene Smal_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3929 
Symbol 
ID6474813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4423524 
End bp4424822 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID642733132 
Productprotein of unknown function DUF214 
Protein accessionYP_002030311 
Protein GI194367701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTCT ACTACATCCA GCTTTCGCTC GCCCGATTCA AGCAGCGAAT CGGCACTCAT 
CTGGCAATCG CTCTCATGCT GGGTGCGGGG GTAGGGATCA CCACCGTGAT GCTTTCCATT
GTTCTCCAGG CATCGTCGGA TCCCGCTCCA GGCCGGAGCT CGGCATTGTT CCGCCCCTAC
CTTGACGCGC GTCCAGATGC ACTGCGCAGT GGCTCTCCGG ATCCTGGCCA GGCACTGACC
TGGCCAGACG CGAAGGTGCT TCTGAACCAA GGCCGGACGT GGAAGCAGGC AGCAATGGCA
GGGGGCGCGG TGACGCTCTC CCGGCCGGGA GAGCCCAGCG CAAGACTGCG TGCCAGGTTC
GCCACGTCCG AAGTCTTCAG TGTCCTTGGC ATTGCCGTTG TTCAAGGGCG CGCATGGACC
GCCGAGGAGG GGCATGCTGC GAGCCGAATC GTGGTTCTGT CGCGTGCGCT CGCAGCGCGC
GAGTGTGCAC AGGACTGCGT TGGTCATCGG TTGGAACTGG GTAGACGCGC CTACACCGTG
GTGGGTGTCG CGGAGGATTG GCATCCGGTG CCAATGTTTC AGGGAGATCT CACACGCAGG
CCGTTTGTGG AACCTGACGA GATCTACCTG CCGGTTGAAA CCGCAATCGC AGACAAACTG
ACTGTTGTGG ACGGGACGGC GATCTGGGGT GGTGACCAGG ACACGGATCC TGCAGGGGCC
AATGTTTCCT GGCTTCAATT GTGGGCGTGG CTGCCCACCG CAGATGATGT CGCCGCTTAC
CGCGCGAATC TGAACGCCTA TGCGCAGGAG AAGGGGCTTC GGATCGAGCC AGGCGCCCAG
CAGGTGGCAC TCTGGCCGTT GATGGATTGG CTGGACAGGC TGGGATTGGT TCCGGAGCAG
GCCAGGATGC AGCTTCGGTT GTCGCTGATC CTTCTCGGCG TGTGCATCGT CAACGCGGCG
GCGCTGCTGA GCTTCAGTCT GGGGCGCCGT CGGCGGGAGC TCGCGATTCG ACGTGCACTG
GGAGCGCGAC GCCGAGACGT GTTCATCCAG CTCATGTGGG AATCCATCGC GGCGGGCGTC
GCAAGCAGTG CGCTCGCTGT CGTCACCTAT ACGCTGGGAA TCCGGGTGGT TGCTGCGGGA
GACGTTCTGC CCAGCGCGAT AACAGCGATG CATGCCGGAG CAGTGCTGAT GGCGGTTGGT
CTGGGAGTCG TCACGACGCT GCTCTGTTCA TTGGTCCCAT CGTTTGGAAT CTGCAGGGTC
AGCTCACTGT CGAGTGCCTT CGCGAAGGGG GCTGCCTGA
 
Protein sequence
MMLYYIQLSL ARFKQRIGTH LAIALMLGAG VGITTVMLSI VLQASSDPAP GRSSALFRPY 
LDARPDALRS GSPDPGQALT WPDAKVLLNQ GRTWKQAAMA GGAVTLSRPG EPSARLRARF
ATSEVFSVLG IAVVQGRAWT AEEGHAASRI VVLSRALAAR ECAQDCVGHR LELGRRAYTV
VGVAEDWHPV PMFQGDLTRR PFVEPDEIYL PVETAIADKL TVVDGTAIWG GDQDTDPAGA
NVSWLQLWAW LPTADDVAAY RANLNAYAQE KGLRIEPGAQ QVALWPLMDW LDRLGLVPEQ
ARMQLRLSLI LLGVCIVNAA ALLSFSLGRR RRELAIRRAL GARRRDVFIQ LMWESIAAGV
ASSALAVVTY TLGIRVVAAG DVLPSAITAM HAGAVLMAVG LGVVTTLLCS LVPSFGICRV
SSLSSAFAKG AA