Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3717 |
Symbol | |
ID | 6474599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4185540 |
End bp | 4186256 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732918 |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_002030099 |
Protein GI | 194367489 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0339005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC ACTATCCAAC GCCGCGCGAG GATGCGCCGC TGGTGGTCTT CGACTTCGAC CACACCCTGT ACGACGGCGA TTCGGGCACG CATCTGTTCG CTTCGCTGAT CAAGCGCAAT CCGCTGCGGA TGCTGGCGGC GCTGCTGGTC ACCCCGATCG CCGGGCCGCT GGTGGCGATG CTGCCAACCC GCCGTACCGG CATTTCGGTC TATGTGTGGA TCGGCAGTTT CGGCCTGCAC CGTGCGCGCG ATTTCAACAA GGTCATCGAC GCCTATGTGC TGCGCAATGA GGCGCAGATG CGCGCCAAGC TGCTGCCGCA GGCGCTGGAG GTGTTCGCCG CGCACCGTGC CAAGGGGGAC CGCGTGGTGG TCGCCACCGG CGCGCCACCG GAACTTGCAC GCGCGATCCT GGCCTTCGTG GCCCATCAGG ACGTGCCGGT GATCGGTACC GAGGTCGGCC CGCGGCTGGG CGGTGTTGGC CCGACCCGCC ACTGCCACAA CGAAGAAAAG ATGCGCATGC TGCGCGAGCG CGGCTACGGC GATATCGACA TCGCCTACTC CGACAGCACC GCCGACCTGC CGCTGCTGCT GGCGGCGAAG GCGCCGGTCG TGGTCAACCC GAAACCGGGC CGCGTGGAGT TCTTCCGCCG CGTGCTGCCG GCCGGTACCC GCATCCTCAA CTGGGGTTGC GTCGACCGCG GCGGCGACAA GGCCTGA
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Protein sequence | MKTHYPTPRE DAPLVVFDFD HTLYDGDSGT HLFASLIKRN PLRMLAALLV TPIAGPLVAM LPTRRTGISV YVWIGSFGLH RARDFNKVID AYVLRNEAQM RAKLLPQALE VFAAHRAKGD RVVVATGAPP ELARAILAFV AHQDVPVIGT EVGPRLGGVG PTRHCHNEEK MRMLRERGYG DIDIAYSDST ADLPLLLAAK APVVVNPKPG RVEFFRRVLP AGTRILNWGC VDRGGDKA
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