Gene Smal_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3717 
Symbol 
ID6474599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4185540 
End bp4186256 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID642732918 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_002030099 
Protein GI194367489 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0339005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC ACTATCCAAC GCCGCGCGAG GATGCGCCGC TGGTGGTCTT CGACTTCGAC 
CACACCCTGT ACGACGGCGA TTCGGGCACG CATCTGTTCG CTTCGCTGAT CAAGCGCAAT
CCGCTGCGGA TGCTGGCGGC GCTGCTGGTC ACCCCGATCG CCGGGCCGCT GGTGGCGATG
CTGCCAACCC GCCGTACCGG CATTTCGGTC TATGTGTGGA TCGGCAGTTT CGGCCTGCAC
CGTGCGCGCG ATTTCAACAA GGTCATCGAC GCCTATGTGC TGCGCAATGA GGCGCAGATG
CGCGCCAAGC TGCTGCCGCA GGCGCTGGAG GTGTTCGCCG CGCACCGTGC CAAGGGGGAC
CGCGTGGTGG TCGCCACCGG CGCGCCACCG GAACTTGCAC GCGCGATCCT GGCCTTCGTG
GCCCATCAGG ACGTGCCGGT GATCGGTACC GAGGTCGGCC CGCGGCTGGG CGGTGTTGGC
CCGACCCGCC ACTGCCACAA CGAAGAAAAG ATGCGCATGC TGCGCGAGCG CGGCTACGGC
GATATCGACA TCGCCTACTC CGACAGCACC GCCGACCTGC CGCTGCTGCT GGCGGCGAAG
GCGCCGGTCG TGGTCAACCC GAAACCGGGC CGCGTGGAGT TCTTCCGCCG CGTGCTGCCG
GCCGGTACCC GCATCCTCAA CTGGGGTTGC GTCGACCGCG GCGGCGACAA GGCCTGA
 
Protein sequence
MKTHYPTPRE DAPLVVFDFD HTLYDGDSGT HLFASLIKRN PLRMLAALLV TPIAGPLVAM 
LPTRRTGISV YVWIGSFGLH RARDFNKVID AYVLRNEAQM RAKLLPQALE VFAAHRAKGD
RVVVATGAPP ELARAILAFV AHQDVPVIGT EVGPRLGGVG PTRHCHNEEK MRMLRERGYG
DIDIAYSDST ADLPLLLAAK APVVVNPKPG RVEFFRRVLP AGTRILNWGC VDRGGDKA