| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3714 |
|---|
| Symbol | |
|---|
| ID | 6474596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4182917 |
|---|
| End bp | 4183711 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642732915 |
|---|
| Product | S-adenosylmethionine decarboxylase |
|---|
| Protein accession | YP_002030096 |
|---|
| Protein GI | 194367486 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
|---|
| TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.17268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAAGC CGTTGCCTCG CCTGAGGCTG CAGGGTTTCA ACAACCTCAC CAAGGCGCTG
AGCTTCAACA TCTATGACGT GTGTTACGCG CGCACCGAAG AGGAGCGTCA GCGTTACATT
GAATACATCG ATGAAGAGTA CAACGCCGAC AGGCTGACTC AAATCTTGAC CGATGTCGCT
GAGATCATCG GCGCCAACAT CCTCAACGTG GCCCGCCAGG ATTACGATCC GCAGGGTGCC
TCGGTGACGA TCCTGATCTC CGAAGAACCG GTGATCGACA AGAAGCAGGC CGGCAAGGAG
CTTATCTCCG ATGCCGTGGT CGCGCACATG GACAAGTCGC ACATCACCGT GCACACCTAT
CCGGAAACGC ACCCGCAGGA AGGTATCGCG ACCTTCCGCG CCGACATCGA TGTGGCTACC
TGTGGCGTCA TTTCGCCGCT GAAGGCGCTG AACTACCTGA TCGAGAGTCT GGAATCGGAC
ATCGTGATCA TGGACTACCG CGTGCGTGGC TTCACCCGCG ATGTGAAGGG CAAGAAGCAC
TACATCGACC ACAAGATCAA CTCGATCCAG AACTTCCTGG CCAAGAACAT CAAGTCGCGT
TACGAGATGT TCGACGTCAA CGTCTACCAG GAAAACATCT TCCACACGAA GATGCACCTG
AAGGACTTCG ACCTGGACCA GTACCTGTTC GAGGAGAAGG CCAAGAACCT GTCGTTCAAG
GAACGCATGA AGATCGAAGC GCTGCTCAAG CGCGAGATCG AAGAGCTGTT CCACGGCCGG
AACCTGTCCG AGTAA
|
|---|
| Protein sequence | MVKPLPRLRL QGFNNLTKAL SFNIYDVCYA RTEEERQRYI EYIDEEYNAD RLTQILTDVA
EIIGANILNV ARQDYDPQGA SVTILISEEP VIDKKQAGKE LISDAVVAHM DKSHITVHTY
PETHPQEGIA TFRADIDVAT CGVISPLKAL NYLIESLESD IVIMDYRVRG FTRDVKGKKH
YIDHKINSIQ NFLAKNIKSR YEMFDVNVYQ ENIFHTKMHL KDFDLDQYLF EEKAKNLSFK
ERMKIEALLK REIEELFHGR NLSE
|
|---|
| |