Gene Smal_3694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3694 
Symbol 
ID6474574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4165286 
End bp4166080 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID642732893 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002030076 
Protein GI194367466 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.595951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG AACTCACCGG CCGTACCGCG CTGGTCACCG CCTCCACCGC AGGCATCGGC 
CTGGCGATTG CCCAGGGACT GGCCGTCGCC GGAGCGCGGG TCATCCTCAA TGGCCGCAGC
ACCGACAGCG TCGAGCGCGC CCGCCAGCGC CTGCTCGACG CCGTTCCAGG CGCCGATGTG
CTTGGCGTGG CAGCCGACCT GTCCGATGCG GCCGGTGTCG ATACGCTGCT GGCCGGCTTG
CCCAAGGTCG ACATCCTGGT CAACAACGCC GGCATCTTCG GCCCCGAGGA CTTCTTCGAA
ACCAACGACG CGACCTGGGA GCGCTACTGG CAGACCAACG TGATGTCCGG CGTGCGCCTG
TCGCGGGCGC TGCTGCCGGC GATGGTTGAT GCCGGCTGGG GCCGCGTGCT GTTCATCTCC
TCCGAGTCGG CCCGCAACAT TCCCGCCGAC ATGATCCATT ACGGGGTCAG CAAGACCGCG
CAGCTGTCGC TGTCGCGCGG CCTGGCCAAG CGCGTGGCCG GCAGTGGGGT CACCGTCAAC
GCGGTGCTGC CCGGACCCAC CCTGTCCGAT GGTTTCGCGG CGATGTTCGA AGATGAACGC
CAGCGCAGTG GCAAGCCACT GGAGCAGATC GGCCGCGAGT TCGTGATGGC GCACCGGCCG
TCTTCGCTGA TCCAGCGCAC CGCCACGGTC GAGGAAGTGG CCAACATGGT GGTGTACCTG
GCCTCGCCGC AGGCTTCGGC CACCTCCGGT GCAGCGCTGC GCGTGGATGG CGGCGTGGTC
GACGATATCG TCTGA
 
Protein sequence
MKIELTGRTA LVTASTAGIG LAIAQGLAVA GARVILNGRS TDSVERARQR LLDAVPGADV 
LGVAADLSDA AGVDTLLAGL PKVDILVNNA GIFGPEDFFE TNDATWERYW QTNVMSGVRL
SRALLPAMVD AGWGRVLFIS SESARNIPAD MIHYGVSKTA QLSLSRGLAK RVAGSGVTVN
AVLPGPTLSD GFAAMFEDER QRSGKPLEQI GREFVMAHRP SSLIQRTATV EEVANMVVYL
ASPQASATSG AALRVDGGVV DDIV