Gene Smal_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3646 
Symbol 
ID6474526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4107291 
End bp4107740 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID642732845 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002030028 
Protein GI194367418 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.231395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC TGCTGGTCCT GCACGGCCCC AACCTCAACC TGCTCGGCAC CCGCGAGCCG 
GAGGTCTACG GCCACACCAC GCTGGCCGAC ATCGACCAGG CGCTGGCCGC CCAGGCGTCC
ACTGCCGGGC ACGCGGTGGA GAGCCTGCAG TCCAACGCCG AGCACGTCCT GGTGGACCGC
GTGCAGGCCG CGCGCAATGA CGGAACCGCT TTCATCCTGA TCAATCCGGC CGCCTTCACC
CACACCTCGG TGGCCCTGCG CGATGCGCTG GCAGCGGTGG CGGTGCCGTT CATCGAGATC
CACCTGTCCA ACCCGCATAC CCGCGAACCG TTCCGCCAGC ACAGCTACTT CAGTGACAAG
GCCGTGGGCG TGGTCTGTGG CTTCGGTGCC GACAGCTATC GCTATGCGAT GGATGCAGCG
CTGGCACGCG TGCGGGTGGC CGGCGCGTGA
 
Protein sequence
MAKLLVLHGP NLNLLGTREP EVYGHTTLAD IDQALAAQAS TAGHAVESLQ SNAEHVLVDR 
VQAARNDGTA FILINPAAFT HTSVALRDAL AAVAVPFIEI HLSNPHTREP FRQHSYFSDK
AVGVVCGFGA DSYRYAMDAA LARVRVAGA