Gene Smal_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3640 
Symbol 
ID6474520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4102398 
End bp4103294 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID642732839 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002030022 
Protein GI194367412 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.683298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.376375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGCAC ATTCGTACGG GTCGACGCAC AGGCAAGATT CATGCCGGAA GCCGATCCAC 
ACACCCGTGA TCCGCTATCC TCGTGCGGCG TTCCCGTACA GCCCTCCCGA CATGCCAGCA
CCGCCGACCG CGCTCTCCTC CATCACCATC GAAGCCAGTA CCTTCGAGGT GATCCATCAG
GACAACGCCG GGGTCGCACG GCAGCCGGCG TCGCTGACCA AGCTGATGAC CGCCTACGCA
GCGTATGCGT GCCTCGAAGA AGGGGGTCGC ACGTGGGACG AGGCGGTCAC CATTGCCGCT
GAAGACGTGC ACGTGGTGGC CGATGATGAA ACGCGGATGG GCCTGGTGCC CGGCGAAAAG
GTCAGCCTGG CACGCTTGCT GGAAGGGTTG ATGATCGTCT CCGGCAATGA TGCGGCGCTG
GCCATCGCGC GCCATCTGGA CGGATCACAA TCTGCATTCC TGGACCGCAT GAACCAGCAC
GCACGCCAGC TCGGCCTGCG CAGCACCTGG TTCGCCAGCG TCTCCGGCAT CACCACGCCG
CACCATGCGT CCAGCGCGCG CGACATGGCA GTGCTGGCGG CCTGCCTGCT GAACGATCAT
CCGCAGATTC TGGCGGTCAC CGCACAGCGC GCGTTCGCGC ACGGCAGCTT CAGCCGCAAC
AACCAGAACG CTCTGCTTGG CGATGACGGC GTGGATGGCT TGAAGACCGG CTACACCCAG
GCCGCGGGCT TCTGCCTGGC CGCCACCGCC TGCCAGCCTG TGCCAGGGCG CGCGCATCCG
GTACGGCTGA TCACAGTGGT GCTTGGCTCG GACAGCCGTG ACGCACGCGA TGCCCTGGCG
CGCGAACGGC TGGCCGCCGG ATTCGCTGCG CTGGCCGGCA GCACCGCCGA CGCCTGA
 
Protein sequence
MLAHSYGSTH RQDSCRKPIH TPVIRYPRAA FPYSPPDMPA PPTALSSITI EASTFEVIHQ 
DNAGVARQPA SLTKLMTAYA AYACLEEGGR TWDEAVTIAA EDVHVVADDE TRMGLVPGEK
VSLARLLEGL MIVSGNDAAL AIARHLDGSQ SAFLDRMNQH ARQLGLRSTW FASVSGITTP
HHASSARDMA VLAACLLNDH PQILAVTAQR AFAHGSFSRN NQNALLGDDG VDGLKTGYTQ
AAGFCLAATA CQPVPGRAHP VRLITVVLGS DSRDARDALA RERLAAGFAA LAGSTADA