| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3574 |
|---|
| Symbol | |
|---|
| ID | 6474454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4026545 |
|---|
| End bp | 4027465 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642732773 |
|---|
| Product | lipid A biosynthesis lauroyl acyltransferase |
|---|
| Protein accession | YP_002029956 |
|---|
| Protein GI | 194367346 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.013317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.967772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGC AACGCAAAGC CCGGCTGGTC TACCGCGCCA CCACCCTGTT CGCCCGCCTG
CCCTGGCCAC TGCTGCGGGG ATTCGCGCGC GCCCTGGCGT GGGCGTGGAT CAATCTCAAC
GCCCGCGAGA GCCGCGTCAC CCGGCGCAAC CTGGAACTGG CCTATCCGGA ACTGGACCGC
ACCGCGCGCG ACCAGCTGCA CCGCGAGCTG CTGCGCTCCA CCGCCCTGCA GGCCATCGAG
ACCCTGCGCC TGTGGAGCCA GGAACCCGCC GACAACCTGC GCCTGCACCT GAAACAGCGC
CATGGCGAGG CCCTGTACGA CGCAGCGCTG GCCAGTGGCA AGGGCGTGAT CGTGGCCGCG
CCGCACTTCG GCAACTGGGA GCTGCTGAAC CAGTGGCTGG CCTCGCGCGG GCAGATCGCC
ATCGTCTACA AGCCGCCGGA GGACGAGGCC AGCGACGCCT TCCTGCAGAT CGTGCGCGGC
GGCCAGAACG TGCAGCAGGT GCGCGCCGAA GGCCCGGCCG TGCGCCAGCT GTTCAAGGTA
CTCAAGGACG GCGGTGCCAC CGGCATCCTG CCCGACCAGC AGCCCAAGGC CGGCGATGGC
GTGTTCGTGC CGTTCTTCGG TGTGCAGGCA CTGACCATGA CCCTGGTCAA CCGCCTGGCC
GAGCGCACCG GGGCCACCGT GCTGTACGGC TGGTGCGAGC GGATCGGCCC GGACATGGAA
TTCGCCCTGC ACATCGAGCC GACCGACCCG GCCGTGGCCG ACCCGGACCC GCAGGTGGCC
GCCACCGCGC TCAACGCCGG CATCGAGCGG ATCGCCCGCC GCGACCCGTC GCAGTACCAG
TGGACCTACA AGCGCTATAC CCTGCGACCA CCGGGCAGCG ACGAGGAAGA CCCGTATGCG
ACCGAAGAGC ATCCGCACTG A
|
|---|
| Protein sequence | MNPQRKARLV YRATTLFARL PWPLLRGFAR ALAWAWINLN ARESRVTRRN LELAYPELDR
TARDQLHREL LRSTALQAIE TLRLWSQEPA DNLRLHLKQR HGEALYDAAL ASGKGVIVAA
PHFGNWELLN QWLASRGQIA IVYKPPEDEA SDAFLQIVRG GQNVQQVRAE GPAVRQLFKV
LKDGGATGIL PDQQPKAGDG VFVPFFGVQA LTMTLVNRLA ERTGATVLYG WCERIGPDME
FALHIEPTDP AVADPDPQVA ATALNAGIER IARRDPSQYQ WTYKRYTLRP PGSDEEDPYA
TEEHPH
|
|---|
| |