Gene Smal_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3542 
Symbol 
ID6474421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3984559 
End bp3985815 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content67% 
IMG OID642732740 
Productpeptidase M24 
Protein accessionYP_002029924 
Protein GI194367314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.80746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC CACCGGCACC ACTGAGCCTG GACGAACGCA ACCGCCGCTG GGCCCTGGCC 
CGCGACATCA TGGCCAGTGA GCAGCTCGAT GCGCTGGTCG TGCATGGCGA TCGGGAAGCC
GCCGCCCCCG CCGGCTTTTC CCCGGACTGC TATTTCACCA ACGATCGCCC AGGCTCGATC
GTGGTATTCG TCGGCGACGA GCCGCCACGG GTATTCACCT TCGCCTCGTT GATGATCGCC
GACCACCTCC AGGCCGGCCT GCGCGGCGAC CTGCAATGGA TCGCGCCCGA GCAGCTGTGG
GTAGGAAAGT CCGGTCAGGA AGTCGGCCGC TGGCTGCAGC ACTGTGGCCT GCACAACGCC
CGTATCGGCG TGCTCGGGCT GGAACCATAC CCGCCGTTCT ACTTCGATGG TGCCATGCCT
GCCCGCACCC TGCAGGGCAT GCAGGCCGCA GTACCGGCGG CGCAGTTCGT ACCGGTCTAC
CGTGCGTTCT TCCAGCGCGC CTCGGTGAAG AGCCAGGAAG AACTGGCACT GATCGCTCAT
GCTGCCTGGA TCGGCGAATC CATGAGCGAG GCACTACGCG CCACCGCCCG CCCGGGGGTC
TCCGAAGCCG AGCTGGTCGC CGCAGTCACC GCCACCTGCT TCGCGCTGGG CGGCTACACC
GCCGAAGTAC TGCTTGGCTC CGGGCCCGAG TATGTCGGCT GGGGGCCGCC CGCCTGGCAG
TACCGTGCAC AGGCGCCGCG CGTGCTGCGC GATGGCGACC TGGTGCTGTC GGAGATCTTC
GCGCTGTATG GGCTGATGGA AACGCAGCAT CAGGCTGCCG TCGCGATCGG CGAAGTACAC
GATGACATCC ATCGCGCCGC TTCCGTGGCA CGGACCAGCT ATGAAGCCGG CCTGTCCACA
CTGCGTGTGG GCAACACCTT CGGCGATGTC GTCGATGCGA TGGAAGCACC GCTGCTGGAA
GCAGGAGGCT GGCATGTGCA CCCGCTGGTC CACAGCCTCA ATCCCTACGG GCCCGTTGGC
TTCGGCCGTG CGCCAGGCAT CGAGGTGTTG CCGGAGGCCG CGCGCTATGC GCACATCACG
CCACTGCCGA CGGTGGGGCG CGAGCTCCCG TTGCAGGCCG GCATGTGCTT CGCCTTCGAA
CCCAACTGCG CGTTCGGCCG GCACATGGCC AACATCGGCG GCACGGTCAT CGTCGGCGAG
CACGCCGGCG TAGCCCTCAA CGACAACTCC ACCTGGTTGA TGCAGGCCGA TGCCTGA
 
Protein sequence
MRTPPAPLSL DERNRRWALA RDIMASEQLD ALVVHGDREA AAPAGFSPDC YFTNDRPGSI 
VVFVGDEPPR VFTFASLMIA DHLQAGLRGD LQWIAPEQLW VGKSGQEVGR WLQHCGLHNA
RIGVLGLEPY PPFYFDGAMP ARTLQGMQAA VPAAQFVPVY RAFFQRASVK SQEELALIAH
AAWIGESMSE ALRATARPGV SEAELVAAVT ATCFALGGYT AEVLLGSGPE YVGWGPPAWQ
YRAQAPRVLR DGDLVLSEIF ALYGLMETQH QAAVAIGEVH DDIHRAASVA RTSYEAGLST
LRVGNTFGDV VDAMEAPLLE AGGWHVHPLV HSLNPYGPVG FGRAPGIEVL PEAARYAHIT
PLPTVGRELP LQAGMCFAFE PNCAFGRHMA NIGGTVIVGE HAGVALNDNS TWLMQADA