Gene Smal_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3529 
Symbol 
ID6474408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3967418 
End bp3968194 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID642732727 
Productprotein of unknown function DUF481 
Protein accessionYP_002029911 
Protein GI194367301 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC GTGTGTCCCT GCTGATCCCC CTGCTGCTGT GCGCGCCGCT TGCGTATGCG 
CAGGATGCCT CCGAACTGGC GGCGATGTCT TCGCCGTGGA GCGGCAGCGG CGGCGAGCTC
GGCTTCGCCT CGGCACGCGG CAACAGCAGC ACCGAGAGCT TCAACGGCCG CCTGCGCCTG
CGCTATACCG ACGGCGACTG GGTGCACAGC ATGGACCTGG CTGGCCTGCG TTCCAGCTCC
AAGGTGACCG AGACCCGCGA CGACGGCTCC ACCAGCCGCC GCAACAACAC CACCGCCAAC
CGCTACACCG GCAGTGCCGG CAGTGCGCTG CAGCTGGGCG AGCACCGCCA GCTGACCGCG
ACGGTGCGTA CCGAGCGTGA CGACTTCGCC ACCTACGACC GCCAGAGTTC GTTCGGTCTG
GGTTACGGCA CCCGCCTGTG GAACACCGAG CGCTTCTCGT TCGACGCGCA GATCGGCCCT
GGTGTGCGCC GCACCCACAG CACCGAGGAC GACCGCACCC GCACCGGCAT GATCGGCCGC
GGCCTGTTCG ACATGAAGTA CTCGCTGACC GACAACACCG ACCTGGTCAA CACCCTGCTG
GTCGAATCGG GTTCGTACAA CACCTTCGGC CAGAACGACT TCGGCGTCTC GGTGAGCATG
AACGAACATC TGGCGCTGAA GGCCGGCTGG CAGGCGCGTT ACAACAGCGA CGTAGCCGCA
GACAAGCGCA AGACCGATAC GCTGACCACG ATGAACGTGG TCTACAAGTT CAAATAA
 
Protein sequence
MSLRVSLLIP LLLCAPLAYA QDASELAAMS SPWSGSGGEL GFASARGNSS TESFNGRLRL 
RYTDGDWVHS MDLAGLRSSS KVTETRDDGS TSRRNNTTAN RYTGSAGSAL QLGEHRQLTA
TVRTERDDFA TYDRQSSFGL GYGTRLWNTE RFSFDAQIGP GVRRTHSTED DRTRTGMIGR
GLFDMKYSLT DNTDLVNTLL VESGSYNTFG QNDFGVSVSM NEHLALKAGW QARYNSDVAA
DKRKTDTLTT MNVVYKFK