Gene Smal_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3508 
Symbol 
ID6474387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3945396 
End bp3946763 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID642732706 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_002029890 
Protein GI194367280 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC CCCTGCACGT CATCATCCTC GCCGCCGGCG CCGGCAAGCG CATGAAATCG 
GTGCTGCCGA AGGTGCTGCA GCCGATCGCC GGCCAGCCGA TGCTGGCGCA CGTGATCGCG
GCCGCCCGCG AACTGGAACC GGCGGCGATC CATGTGGTCT ATGGCCATGG TGGTGAAGCG
GTGCGCCAGC ACTTCGCCGG CCAGCCCGAC CTGCAGTGGG CCGAGCAGGC GCAGCAGCTG
GGCACCGGCC ATGCGGTCGC CCAGGCGATG CCGCAGGTGC CCGATGCCGC ACAGGTGCTG
GTGCTGTACG GCGACGTGCC GCTGATCCGC GCACAGACCC TGCGTGACCT GTTGGCGCAG
CCCGGTCGGC TGGCCGTGCT GGTGGCCGAG ATGGATGATC CGACCGGATA TGGCCGCGTG
CTGCGCGACG CCGAGGGCAA GGTCGGCTCG ATCGTCGAGC AGAAGGACGC CAACGACGAC
CAGCTGCGCG TACGCACGAT CAATACCGGC ATCATCGCCG CCGAATCCAC CGCGCTGCGC
CGTTGGCTGT CGCAGCTGTC GAACAGCAAT GCACAGGGCG AGTACTACCT CACCGACGTG
TTCGCCTTCG CCGCGCATGA GTACACCCCG GCCGAGATGG CGCTGGTGGC TGATGCACAG
GAAGCCGAAG GTGCAAACGA TCCCTGGCAG CTGTCGCAGC TGGAGCGCGC CTGGCAGCGC
CGCGCCGTGC GCGCTTTGTG CGCGCAGGGT GCGCGCGTGC GTGATCCGGC GCGCCTGGAC
ATCCGCGGTA CTGTCAGTGT CGGCAACGAC GTGCTGATCG ATGTTGACGT CGTGCTCGAG
GGCAACATCG TGCTGGGCGA TGGCGTGACC ATTGGACCGT TCAACCGGCT GAAGGACGTC
AATCTCGGCC CGGGCACCGA AGTGCGTGCG CACTGCGACC TGGAAGGCGT GATCACCGAA
GGTGCTGCGC AGGTAGGACC GTTCGCCCGC CTGCGCCCCG GTACCGTGCT GGCCGACGGC
GTGCACGTGG GCAACTTCGT CGAGACCAAG AAGGTCACCC TGGGAGTGGG CAGCAAGGCC
AACCACCTGA CCTACCTGGG CGACGCGGTG ATCGGCAGCA AGGTGAACAT TGGTGCCGGC
ACCATCACCT GCAACTACGA CGGCGTCAAC AAGTCGACCA CCACCATCGG CGACAACGCT
TTCATCGGTT CCAACAGTTC GCTGGTAGCA CCGGTGACCA TTGGCGACAG CGCGACGATT
GCCGCCGGTT CGGTCATCAC CCGCGACGCC CCGGATGGCA AGCTGACCCT GGCACGTGCA
CGACAGGAAA CCATCGATGG CTGGAAGCGC CCGCTCAAGA AGTCCTGA
 
Protein sequence
MTQPLHVIIL AAGAGKRMKS VLPKVLQPIA GQPMLAHVIA AARELEPAAI HVVYGHGGEA 
VRQHFAGQPD LQWAEQAQQL GTGHAVAQAM PQVPDAAQVL VLYGDVPLIR AQTLRDLLAQ
PGRLAVLVAE MDDPTGYGRV LRDAEGKVGS IVEQKDANDD QLRVRTINTG IIAAESTALR
RWLSQLSNSN AQGEYYLTDV FAFAAHEYTP AEMALVADAQ EAEGANDPWQ LSQLERAWQR
RAVRALCAQG ARVRDPARLD IRGTVSVGND VLIDVDVVLE GNIVLGDGVT IGPFNRLKDV
NLGPGTEVRA HCDLEGVITE GAAQVGPFAR LRPGTVLADG VHVGNFVETK KVTLGVGSKA
NHLTYLGDAV IGSKVNIGAG TITCNYDGVN KSTTTIGDNA FIGSNSSLVA PVTIGDSATI
AAGSVITRDA PDGKLTLARA RQETIDGWKR PLKKS