Gene Smal_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3496 
Symbol 
ID6476775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3933027 
End bp3933542 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID642732694 
Productlactoylglutathione lyase 
Protein accessionYP_002029878 
Protein GI194367268 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.146711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.38901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC CCGCCCTGCG CGATGTCCCC GGCGTCGCCG CCCAGGCTCC GGCCGAAACC 
ACCGGCTTCG TGTTCAACCA CACCATGCTG CGGGTGAAGG ACATCACCGC CTCGCTGGAC
TTCTACACGC GCGTGCTGGG CTACCAGCTG ATCGACAAGC GCGACTTCGC CGAAGCCCAG
TTCAGCCTGT ACTTCCTGGC CTACGTACCG GCCGGCGCCG TGGTACCCGA GGATGACGAC
GCCCGCCGCG TGTGGATGGC CGGCCTGCCG GGCGTGCTGG AGCTGACCCA CAACCACGGT
ACCGAGAGCC AGGACGGCGC GGTCTACCAC GACGGCAACA GCGACCCGCG CGGCTTCGGC
CACATCTGCG TGTCGGTGCC GGACATCGAG GCCGCCTGCC AGCGCTTCGA GGATCTGGGC
GTGACCTTCC AGAAGCGCCT GACCGACGGT CGCATGAAGA ACCTGGCCTT CATCAAGGAC
CCGGACGGCT ACTGGGTCGA GATCATCGCC AACTGA
 
Protein sequence
MTIPALRDVP GVAAQAPAET TGFVFNHTML RVKDITASLD FYTRVLGYQL IDKRDFAEAQ 
FSLYFLAYVP AGAVVPEDDD ARRVWMAGLP GVLELTHNHG TESQDGAVYH DGNSDPRGFG
HICVSVPDIE AACQRFEDLG VTFQKRLTDG RMKNLAFIKD PDGYWVEIIA N