Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3492 |
Symbol | |
ID | 6476771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3928207 |
End bp | 3929010 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732690 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002029874 |
Protein GI | 194367264 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.563109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGG TACCGCCGAT TGCCGCATGG CCGGCCGCGC CGCTGTCGGG CAAGGTAGTG CTGGTCACCG GCGGTGCCAA CGGCATCGGC CGCGGTATTG CCCAGGCCGT GCTCGGTGCC GGTGGCCGCG TGCTGATCGG CGACCTGGAC ACCGAGGCCG GCGAAGCGTG CCTGGCGGAA TGGCAGCGTG GCGACGATGC CGCGTTCCAA CCGTTGGACA TCACAGATGA AGCCAGCGTG CGCGCTTTCA TCGCCGTGGC CCTGCAGCAT TTCGGTCGCA TCGATGGGCT GGTCAACAAC GCTGGCATCG CCGGCCCGCA CGGTACGTTG CTGCAGGACA TGGACTGGGA CGAATGGCAG CGCCGCCTTT CGTCGCTGCA TGGTGCGTTC CTGTGCAGCA AGCATGCGCT GCCGGCACTG TCGGCGAATG CTGCCGGCAC AATCATCAAC ATCGCCTCGA CCCGCGCGTG GCAATCCGAA TCACATAGCG AAGCCTATGC CGCAGCCAAG GGTGGACTGG TCGCCTTCAC CCACGCGCTG GCGATCAGCA GCGGGCCGGC GGTGCGGGTG AACAGCATCA GCCCCGGCTG GATCGGCACC TCTGACTGGC AGGCGCCCTC ACGCCGACAC GCGCCGCAGT ACTCGGCCGA AGACCATGCA CAGCATCCAG TGGGGCGTGT TGGACGCCCC GGGGACATCG GCGCCCTGGC GGTGTACCTG CTGTCGTCGT TGTCCGGTTT CACTACTGGC CAGGACTTCG TCGTGGACGG CGGCATGACC CGGAAGATGA TCTACGCCGA ATAG
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Protein sequence | MSTVPPIAAW PAAPLSGKVV LVTGGANGIG RGIAQAVLGA GGRVLIGDLD TEAGEACLAE WQRGDDAAFQ PLDITDEASV RAFIAVALQH FGRIDGLVNN AGIAGPHGTL LQDMDWDEWQ RRLSSLHGAF LCSKHALPAL SANAAGTIIN IASTRAWQSE SHSEAYAAAK GGLVAFTHAL AISSGPAVRV NSISPGWIGT SDWQAPSRRH APQYSAEDHA QHPVGRVGRP GDIGALAVYL LSSLSGFTTG QDFVVDGGMT RKMIYAE
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