Gene Smal_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3484 
Symbol 
ID6476763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3919991 
End bp3920680 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID642732682 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002029866 
Protein GI194367256 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.529248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.672629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG CCACTGCTGA AGGTTTCTTC CGCCACCTGG ATGCGGACAA ATGGGTGGAT 
ATCGGCAAGG CCACCATCGA GACGCTGCTG ATGATGGCCG GTTCGCTGCC ACTGACTCTG
GCCATTGGGT TGCCGATGGG CGTGTTGTTG TACGTGTTCG GTGCGCCGCA GCTGAAGCGC
CGGCCCTTTG CCTACGGCGT GCTGGCGCTG GTGGTGAACC TGCTGCGCTC GGTACCGTTC
ATCATCCTGA TGGTGGTGCT GATCCCGGTG TCGCTGTGGC TGATGGGCCA GTCGATCGGT
GTGCTCGGCA CGCTGCCCGC ACTGGTCATC GGTGCGGCAC CGTTCTACGC GCGGCTGGTC
GAGACCGCCC TGCGTGAAGT AGACCGCGGC GTGGTCGAGG CAGCACAGTC GATGGGCGCC
ACCACCTGGC AACTGGTCAG CCGGGTACTG CTGCCCGAAG CCCGCCCGGG CCTGATTGCA
GCCGCGACCG TAACCACGGT GGCGCTGGTC GGGTTCACGG CAATGGGCGG TGCGATTGGT
TCCGGTGGCC TGGGCGACCT GGCGCTTCGC GAAGGCTACC AGCGCAACCG TACCGACGTG
GCCCTGGTCA CCGTGGTGGT ATTGCTGGTG CTGGTGCAGC TGCTGCAGAT GCTCGGCGAC
CGCCTGGTCA CGCATTACAG CCGCAAATAA
 
Protein sequence
MIAATAEGFF RHLDADKWVD IGKATIETLL MMAGSLPLTL AIGLPMGVLL YVFGAPQLKR 
RPFAYGVLAL VVNLLRSVPF IILMVVLIPV SLWLMGQSIG VLGTLPALVI GAAPFYARLV
ETALREVDRG VVEAAQSMGA TTWQLVSRVL LPEARPGLIA AATVTTVALV GFTAMGGAIG
SGGLGDLALR EGYQRNRTDV ALVTVVVLLV LVQLLQMLGD RLVTHYSRK