| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3476 |
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| Symbol | dapF |
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| ID | 6476755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3911328 |
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| End bp | 3912179 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642732674 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002029858 |
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| Protein GI | 194367248 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.631348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG CCGGGTCCAA GGCCCTGCGC TTCAGCAAGA TGCATGGCGC AGGCAATGAT
TTCGTAGTGA TCGACCTGCG TGACGGCACC GTGCCACCTA CGCCCGAGCT GGCCGCGCGC
CTGGCCGATC GCCACACCGG TGTCGGCTGC GATCAGATCC TGACCATCGA AGCGCCGCGT
GCGGAAGGCT CGGTGGCTTC GTACCGGATC TGGAATGCCG ATGGTTCCAA TTCCGAACAG
TGTGGCAACG GCGCGCGCTG CATCGCCGCC TGGCTGGTGC GCGAGGGCAG TGCACAGGGC
GATGCGTTCG TCATCGACAG CCCGCTGGCC AGCCACCAAG TGAAGGTGCT GGGCGATGGC
CACTACGCGG TGACCATGGG TGTGCCCGCG TTCGAGCCGG CCAACGTGCC GTTGGTGGGT
TTCGCCCATC CGCGCGAGGA ATACCTGCTG CCGCTGCAGG GCGAGACCGT GCGTTTTGCC
GCCGTGTCGA TGGGCAATCC GCACGCGGTG ATTGAAGTCG GCCTGATCGA TGCCGCACCG
GTCGAGCGCG TCGGTTCGCT GCTGCAGCAG CATGCGTCGT TCCCGCGTTC GGTGAACGTG
GGCTTCGCCC AGGTGATGAA CCCCGCGCAT GCACGCCTGC GCGTGTTCGA GCGCGGCGTT
GGCGAAACCC TGGCCTGCGG CAGCGGTGCC TGTGCCGCTG CGGTGACCCT GATGCAGCGT
GGCCGCCTGC AGCGCGATGC GCGCATCAGC CTGCCCGGTG GTGACCTCCG CATCCAGTGG
CCGGGCGATG GCCAGCCGGT GGTAATGGCC GGCCCGACCG CATTCGTCTT CGAAGGGGAG
TGGATCGCAT GA
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| Protein sequence | MSKAGSKALR FSKMHGAGND FVVIDLRDGT VPPTPELAAR LADRHTGVGC DQILTIEAPR
AEGSVASYRI WNADGSNSEQ CGNGARCIAA WLVREGSAQG DAFVIDSPLA SHQVKVLGDG
HYAVTMGVPA FEPANVPLVG FAHPREEYLL PLQGETVRFA AVSMGNPHAV IEVGLIDAAP
VERVGSLLQQ HASFPRSVNV GFAQVMNPAH ARLRVFERGV GETLACGSGA CAAAVTLMQR
GRLQRDARIS LPGGDLRIQW PGDGQPVVMA GPTAFVFEGE WIA
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