Gene Smal_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3409 
Symbol 
ID6476619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3828788 
End bp3829339 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID642732607 
ProductPeptidase M23 
Protein accessionYP_002029791 
Protein GI194367181 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.703965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAC CCCCCTCTCC TGCCCACCGC CTGCGCCGCT GGCTGCTGCG CGGCCTGTGG 
CTGGGCATTG CCATCGTTGC CGCGATGGCG CTTTGGAACA GCCCGTGGGC GGCCACGCCG
CGAATGCTCT GGTCGCTGAC ACGGATGCCG GCTGCCACCG AACTGCCGGT GCCGGTGGAG
GGTGTACGCC CCCGGCAGAT TGCCGACACC TTCGGCGCGC CGCGAGGCCG TGACCGCTCC
CACGCCGGTA TCGACATCTT CGCCAAGCGC GGCACGCCGG TGCGCAGCGT CACTGCCGGC
GTCATCGCGG ATGTCAGCGA ACGCGGCCTC GGTGGCCGCC AGGTCTGGGT GATCGGGCCC
GGGCGCGAGC GCTACTACTA CGCGCATCTG GAAGACTGGG CAGAGGGCCT GGCGCGCGGC
CAGGTGGTCC AGGCCGGTGA CCTGCTCGGC CACGTCGGCG ACAGCGGCAA CGCCAAGGGC
ACGCCGCCGC ACCTGCACTG GGGCATCTAC GGCACGAACG GCCCCCGCGA CCCGTTGCCG
CTGCTGCGCT GA
 
Protein sequence
MSTPPSPAHR LRRWLLRGLW LGIAIVAAMA LWNSPWAATP RMLWSLTRMP AATELPVPVE 
GVRPRQIADT FGAPRGRDRS HAGIDIFAKR GTPVRSVTAG VIADVSERGL GGRQVWVIGP
GRERYYYAHL EDWAEGLARG QVVQAGDLLG HVGDSGNAKG TPPHLHWGIY GTNGPRDPLP
LLR