Gene Smal_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3353 
Symbol 
ID6476563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3768954 
End bp3770297 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content66% 
IMG OID642732551 
Productsodium:dicarboxylate symporter 
Protein accessionYP_002029735 
Protein GI194367125 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCC CGACCGCAGC CCCGGCGCCT GCAAAGCCGT TGCCGATCTA TCGCCAGCTG 
TACTTCCAGG TGATCGTGGC GATCGTCCTG GGCGCCATCC TCGGCCACTA CGAACCGCTG
GTTGGCGAGA AGATGAAGCC GCTCGGCGAC GCCTTCATCA ACCTGGTGAA GATGATCATC
GCGCCGGTGA TCTTCCTGAC CATCGTCACC GGCATCGCCA GCATGACCCA CCTGCGCACG
GTGGGCCGCG TATTCGCCAA GGCGATGGCG TACTTCCTGT TCTTCTCCAC GCTGGCGCTG
ATCGTCGGCA TGATCGTGGC GCACGTGGTG CAGCCCGGCG CCGGCATGAA CATCAACCCG
GCCGAGCTGG ACCAGACCGC GGTGCACAGC TACGTCGAGA AGTCGCACGA CCTGACTCTG
GTCGGCTTCC TGATGGACAT CATTCCGAAG ACGCTGGTGA GCGCCTTCGT CGATGGCAAC
ATCCTGCAGG TGCTGTTCAT CGCGGTGCTG TTCGGCATCG CCCTGGCATC GGTGGGCGAG
AAGGGCAAGC CGATCCTGAA CTTCCTGGAG GCGCTGGTCG CCCCGGTGTT CAAGCTGGTG
CACATCCTGA TGAAGGCCGC CCCGATCGGC GCCTTCGGTG CGATTGCCTT CACCATCGGC
AAGTACGGCG TCGGTTCGCT GGTCAACCTG GCCTGGCTGG TCGGCTCGTT CTACCTCACC
GCATTCCTGT TCGTAGCGGT GATCCTGGGC GTGGTCTGCC GCCTGTGCGG GTTCTCGGTG
TTCAAGCTGG CGCGCTACCT GAAGGCCGAA CTGCTGTTGG TGCTGGGCAC GTCCTCGTCG
GAGTCGGCGC TGCCGTCGCT GATGGAGAAG ATGGAACGCG CCGGCTGCAG CAAGTCGGTG
GTCGGCCTGG TGGTTCCCAC CGGCTACTCG TTCAACCTGG ACGGCACCAA CATCTACATG
ACCCTGGCCG CGCTGTTCAT CGCCCAGGCC ACCAATACCG AACTGACCCT GGGCCACCAG
ATCGCCCTGC TGCTGGTTGC CATGCTCAGT TCCAAGGGCG CCGCGGGTGT CACCGGTGCC
GGCTTCATCA CCCTGGCCGC TACGCTGGCG GTGGTGCCGG AAGTGCCGGT GGCCGGCATG
GCGCTGATCC TCGGCGTGGA CCGCTTCATG AGCGAGTGCC GCTCGCTGAC CAACTTCATC
GGCAACGCCG TGGCCACCGT GGTGGTCTCG CGCTGGGAGG GGGCGCTGGA CCGCAACCGC
CTGCAGCTGG CGCTGGACGG CCGCGAGAGC GAGCTGCCGC CGCCGATCGA CGTGGTGCCC
GAGGCACTGC CGGCCAAGGG CTGA
 
Protein sequence
MHIPTAAPAP AKPLPIYRQL YFQVIVAIVL GAILGHYEPL VGEKMKPLGD AFINLVKMII 
APVIFLTIVT GIASMTHLRT VGRVFAKAMA YFLFFSTLAL IVGMIVAHVV QPGAGMNINP
AELDQTAVHS YVEKSHDLTL VGFLMDIIPK TLVSAFVDGN ILQVLFIAVL FGIALASVGE
KGKPILNFLE ALVAPVFKLV HILMKAAPIG AFGAIAFTIG KYGVGSLVNL AWLVGSFYLT
AFLFVAVILG VVCRLCGFSV FKLARYLKAE LLLVLGTSSS ESALPSLMEK MERAGCSKSV
VGLVVPTGYS FNLDGTNIYM TLAALFIAQA TNTELTLGHQ IALLLVAMLS SKGAAGVTGA
GFITLAATLA VVPEVPVAGM ALILGVDRFM SECRSLTNFI GNAVATVVVS RWEGALDRNR
LQLALDGRES ELPPPIDVVP EALPAKG