Gene Smal_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3273 
Symbol 
ID6476328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3676820 
End bp3678046 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID642732471 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_002029655 
Protein GI194367045 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACG CCCACGACCA CTGCAACCAC CTGCCCGGCG AAGCCTGCTC CGCTGACCAC 
GACAGCCCGC CGCGACTGGT GCCACCGCCG CTGTCGCTGT ACGTGCACCT GCCGTGGTGC
GTGCGCAAAT GCCCGTACTG CGATTTCAAT TCGCACCAGG CCAAGGGCGA GCTGCCGTTC
GATGCCTACA TCGATGCGCT GCTGCGCGAC CTCGACCAGG ACCTGCCGCT GGTCTGGGGC
CGGGTGGTGC ACAGCGTGTT CTTCGGTGGT GGTACGCCCA GCCTGTTCCC GCCGGAAGCG
ATCGACCGCT TCCTGCAGCA GGCCAGCGCA CGCCTGCGCT TCGCGCCCAA TGCCGAAATC
ACCCTGGAAA CCAACCCGGG CACCGCCGAA CACGGCCGCT TCGACCGCTA TCGCGCAGCC
GGCGTGAACC GCCTCAGCTT CGGCATCCAG AGTTTCGACG ATGCGATGCT CAAGCGCCTG
GGCCGCATCC ACGACAGTGG CGAGGCCGAG CGCGCGGTGA AAATGGCGCA GGACGCGGGC
TATGACAACT TCAACATCGA CCTGATGTAC GCACTGCCGG AACAGACCCT GGCCGGTGCC
GAGGCTGATC TGGAACGCGC GTTCGCGCTG CAGCCGGCGC ACATCTCGCA CTACCAGCTG
ACCCTGGAAC CGAACACGGT GTTCTTCGCG CGGCCGCCGC AGGGCATTCC CGATGAAGAC
AACGCCTGGG ACATGCAGGA GCACTGCCAG GCGCTGCTGG CGCAGGCCGG TTTCGGCCAG
TACGAAGTCA GTGCCTACGC CCGCCCCGGC CGGCAGAGCG CGCACAACCT GAACTACTGG
CGCTTTGGCG ACTATCTCGG CATCGGTGCC GGCGCGCACG GCAAGATCAG CTCCGGTGCC
GAGGAACACG TGCTGCGGCG TTGGAAACTG AAGCATCCGC AGGCCTACCT GGACAGCGCT
GGCACGCCAG CCTCGTTCGG CGGTGACGAG GTGATCGCGC CCGAGCGCCT GCCGTTCGAG
TACATGCTGA ATCTGCTGCG CCTGCATGAA GGCTTTGGCC TGCGCGATTT CGAGTCGCGC
ACCGGGCTGC CGCGCAGCGT GCTCGATGCG CCGCTGGCCG AGGCCGTGCA GCGCGGTTGG
CTGGACGTGA CGGATGGCCA TGTGCAGCCG ACCGAGCTGG GCCGGCGTTT CACCAACGAT
GTGGTGAGCC TGTTCCTGGA GGAATGA
 
Protein sequence
MPHAHDHCNH LPGEACSADH DSPPRLVPPP LSLYVHLPWC VRKCPYCDFN SHQAKGELPF 
DAYIDALLRD LDQDLPLVWG RVVHSVFFGG GTPSLFPPEA IDRFLQQASA RLRFAPNAEI
TLETNPGTAE HGRFDRYRAA GVNRLSFGIQ SFDDAMLKRL GRIHDSGEAE RAVKMAQDAG
YDNFNIDLMY ALPEQTLAGA EADLERAFAL QPAHISHYQL TLEPNTVFFA RPPQGIPDED
NAWDMQEHCQ ALLAQAGFGQ YEVSAYARPG RQSAHNLNYW RFGDYLGIGA GAHGKISSGA
EEHVLRRWKL KHPQAYLDSA GTPASFGGDE VIAPERLPFE YMLNLLRLHE GFGLRDFESR
TGLPRSVLDA PLAEAVQRGW LDVTDGHVQP TELGRRFTND VVSLFLEE