Gene Smal_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3200 
Symbol 
ID6476172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3581922 
End bp3582758 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID642732397 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_002029582 
Protein GI194366972 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGATC CCTGGAAGAA TGCCCGCCGT CCGTCGTCGC GACCGCCGCG GGCCACCCCG 
CTGCCGCCGC GTGAGGGCGG CACCCCGCCA CCGCCGGGGC GTGGCAACGA CGAACTGCGC
CTGTACGGCT GGAACGCCGT GCAGGCCCTG TTCGACAAGC GCCCGCAGGC ACTGCGCAAG
CTGTACCTGG TGGAATCGCT GATTCCGCGC ATGCAGCCGG TGCTGAAGTG GTGCGTGGCC
AACCGCGTCG GCTACCGCGT GGTGGAGGAG GGCGACCTCA ACAAGCTGGC TGCCACCACC
CATCACGAAG GCCTGGTGGC CGACGTGCTG CGTGCGCCCG TCGTACCGCT GGCGCAGTGG
CTGGAGGATC TGGGCGAAGG CCCGGCGCTG GCGTTGTGGC TGGACGGTGT CGGCAATCCC
CACAACTTCG GCGCAATCCT GCGCTCGGCC GCGCACTTCG GTGTCAAGGC GCTGCTGCTG
CCGGCCGGCA GCACGCTGGC GCTGTCTGGT GCCGCTGCGC GCGTGGCCGA AGGTGGCGCC
GAATCGGTAC CGCTGGTGCA GTTGCCGGAC AACGCACAGG CCATGGCACA GCTGCGAGCG
GCCGGTTTCG GGCTGGCCGC GACACTGGTC GAGGGCGGTG AGGACGTGTT CCGCGCATCG
CTGCCGGCAC GACTGGTCTA CGTAATGGGT GCCGAAGGCG AAGGCATGGA CCGCAGCCTT
GCCAGCGAAT GCGACCTGCA GGTCTCGATT CCCGGCAGCG GCGCGGTGGA GAGCCTGAAC
GTGGCCTCGG CCACGGCCGT GTTGCTGGCG CAGTGGGCGA GCCGCCGCCA CGGCTGA
 
Protein sequence
MNDPWKNARR PSSRPPRATP LPPREGGTPP PPGRGNDELR LYGWNAVQAL FDKRPQALRK 
LYLVESLIPR MQPVLKWCVA NRVGYRVVEE GDLNKLAATT HHEGLVADVL RAPVVPLAQW
LEDLGEGPAL ALWLDGVGNP HNFGAILRSA AHFGVKALLL PAGSTLALSG AAARVAEGGA
ESVPLVQLPD NAQAMAQLRA AGFGLAATLV EGGEDVFRAS LPARLVYVMG AEGEGMDRSL
ASECDLQVSI PGSGAVESLN VASATAVLLA QWASRRHG