| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3188 |
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| Symbol | |
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| ID | 6476160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3569474 |
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| End bp | 3571327 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642732385 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_002029570 |
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| Protein GI | 194366960 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCA GCAAACACCC GATCCGCTCC CTGATGGCGG CCGCGATCGC GCTGGCCGCG
CTTCCGGCCA TGGCAGGCGA AAACCCGTAT TCGAAGGCGG TGTTCTTCGG CGACAGCCTG
ACCGATGCCG GTTACTTCCG CCCGCTGCTG CCCGAGGCCA CGCAGGGGCT CTCCGGCCAG
TTCACCACCA ACCCGGGCTG GGTGTGGTCG CAGCAGGTCG CCAACTACTA CGGCCTTAAC
AAGGACCCCA ACGGCAACGG CCAGAACGGC GACAACTACG CTGTCGGCGG GGCCCGCGTG
TCGGTGGAAG GCAGCGGTGC CCTCGGCGCG ATCCCGTCGT TGAAGTCGCA GGCGGCCCGC
TACCTGGCTG CAAACGGTGG CAAGGCTGAC CGCAACGCCC TGTATACCGT CTGGGGTGGC
GCAAACGACC TGTTTGCCGC CGCCGGCGCT GCCGGTGCGG GTGCGCCGCC GGCCCAGGTG
CAGGGCATCA TCGGCGCGGC AGTCACCGAC CAGATCGCGC TGGTCGGCGC CCTGAAGCAG
GCCGGTGCCC AGTACGTGCT GGTGCCGAAC CTGCCGGACG TGGGCATCAC CCCGCAGTTC
CGTGGCCCCA ACGCGGCGGC GGCCACCGCC ATGTCGGTCG GCTACAACAA GGCGCTGTAT
GGCGGCCTGA AGCAGGCGGG CATCGAGTTC ATTCCGCTCG ATACCTTCAG CATCCTGCGT
GAAGTGACCG CCAACCCGGG CATGTACGGC TTCACCAACG TCACCGGCAC CGCCTGCAAG
ATCAACCCGG CCAACACCAC GGGCAGCATC ATCGGCTGCA ACCCGACCAC CTACGTCAGC
CCCGATGCGT ACCAGACCTA TCTGTTCGCA GATGGCGTGC ATCCCACCGT TACCGGCCAC
CAGCTGCTGG GCCAGTACGC CGTCTCGGTG CTGGAGGCTC CGCGCCTGCA GCAGGTGCTG
AGCCACTCGG CACAGACCAT TGGCCGCTCG CGTGCCGATC AGGTCAGCAA TCACCTGGGT
GCCCGTCCGG CTGATGGCCT GTCGTGGTGG GGTGGCGTGC GTGGCGACCT GCAGCGCTAT
GACCACGCAG ACCTGTATGA CGGCCTCGCT CCGGCCGGCC TGTTCGGTAT CGACTGGGCA
CGCAACGGCG TGGTGGTCGG CGGCTTCGCC GGTTTCGGCC GCCTGAATGC CGACTTCGGC
AACAGCCGTG GTGACTTCAC CCAGAAGGAC ACCACCGCCG GCCTGTTCGC GGCATGGTAC
GGCGACCGCG TCTGGGTCAA CGGCCAGGTC AGCTACACCT GGTTGTCGTA TGACGTGAAC
CGCAAGGTCC AGCTGGGCCC GGCCACCCGC GAACACGGTG GTTCCCCGGA TGGCAGCAAC
CTGACCGCCG CACTGAACGC CGGTTACGAG TTCGGCACCG AAGGTGGCTT CCGTCATGGT
CCGGTCGCTG CGGTGATCTG GCAGAAGGTC AAGATCGACG GTTACAGCGA AAGCGCCGCT
GCGGGCACGC TGGCCACCGC CCTGGGTTAC GACCGCCAGA ACGTCGACTC CACCGTCGGT
CGTATCGGCT GGCAGGCCCG CTTCGATGGC GGCACCGTCA AGCCGTACGT GCAGGTGACC
TACGACCACG AGTTCGAGGA CACCAAGCAG GCCAGCGCCT GGCTGCAGAC GCTGCCGGAG
CTGGGCAGCT ACCGCGTGCC GGGCCTGGAC TTCGACAAGA ACTACGCCAC CGCCGTGCTG
GGTGCGCGTA TGGACCTGTT CGGCCTGCAG GGCAACGTTG GCCTGAGCAC CACGGCTGCG
CAGAAGCGCG CCCGTGATGC CTCGATCTTC GCCACCGTCA GCGGCAGCTT CTGA
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| Protein sequence | MQLSKHPIRS LMAAAIALAA LPAMAGENPY SKAVFFGDSL TDAGYFRPLL PEATQGLSGQ
FTTNPGWVWS QQVANYYGLN KDPNGNGQNG DNYAVGGARV SVEGSGALGA IPSLKSQAAR
YLAANGGKAD RNALYTVWGG ANDLFAAAGA AGAGAPPAQV QGIIGAAVTD QIALVGALKQ
AGAQYVLVPN LPDVGITPQF RGPNAAAATA MSVGYNKALY GGLKQAGIEF IPLDTFSILR
EVTANPGMYG FTNVTGTACK INPANTTGSI IGCNPTTYVS PDAYQTYLFA DGVHPTVTGH
QLLGQYAVSV LEAPRLQQVL SHSAQTIGRS RADQVSNHLG ARPADGLSWW GGVRGDLQRY
DHADLYDGLA PAGLFGIDWA RNGVVVGGFA GFGRLNADFG NSRGDFTQKD TTAGLFAAWY
GDRVWVNGQV SYTWLSYDVN RKVQLGPATR EHGGSPDGSN LTAALNAGYE FGTEGGFRHG
PVAAVIWQKV KIDGYSESAA AGTLATALGY DRQNVDSTVG RIGWQARFDG GTVKPYVQVT
YDHEFEDTKQ ASAWLQTLPE LGSYRVPGLD FDKNYATAVL GARMDLFGLQ GNVGLSTTAA
QKRARDASIF ATVSGSF
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