Gene Smal_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3180 
Symbol 
ID6476151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3562561 
End bp3563928 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID642732376 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002029562 
Protein GI194366952 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGG ATACCGCATC GCCACCCCGG AAGCCTGATT CCGTGGCAGC CAAGGGGGAG 
CGCCGGCGTA CGCCGTATCG GCGGCGCCTG CGCAGCCGCA TCATCGTGTC GTTCGTGTTG
TTGGGCTTCT GCCTGACAAC ACTGTTCGCG TTCGCCACCA ACTGGGCCCG CCTTCGCGTG
GAAAACCAGC TGGTGGAAGA GTTGATGAAC CGCAACATCG ACGAGTACGC GCGGCGCTAT
TACGAACATC CGGGCCACAA CCCGGATGCC CCCGTGCTGC AGATCAAGGC GTACGCGTAC
TCCAAGGACA AATTCGACCG GGTGCGCGAA GAGCGCGCGC AATGGGCCGG CTTCTCCGAT
GGCATCCACA GCGTCAGCGG TGATGAGCAC GGCGAGGCGT ATTCCTACAA GCTGGCGGTA
CGCAAGACGC CTGACGCCTG GTTCTTCCTC GCCTATGACA TGACCGACAG CGTGCGCGGT
GGCAAGCAGC TCAACCGCGC GCTGGTGCTG TCGGTGCTGG TGTTCAGTGT GCTGTCGCTG
GTGCTGGGCT GGTGGTCGGC GTCGAAGGTG ATGAAGCCGG TGTCGGACCT GGCCGCGCGG
CTGCGTGCCT ATCGCGGCGG CACCAGTGAC CCGGAACCCC TGGCGCCACG CTTCCCCGAC
GACGAAGTGG GGCAGCTGGC ACAGGCGCTG GACGACTATT CCTCGCGGCT GACCGAAGTG
GTGCAGCGCG ACCGTGAGTT CAACGCCGAC GTCAGCCACG AACTGCGCAC GCCGCTGGCG
GTGATCCGTG GCGCTACCGA ACTGCTGCTG ACCCGGCCCG GCCTGGACGA GAAGGTACTG
CAGCGCCTGC AGCGCATCCA GCGCGCCGAA CAGCAGTGCA GCGACCTGAT CGGCGCGCTG
CTGCTGCTGT CGCGCAACGA GCGCGGGCAG GGCACCAGCA ACGTGGCCCG CGTGGCCGAG
CAGCTGCTGG ACGCGCATCG CGCGCAGTTG GGCGGCAAGC CGCTGGAGCT GCTGCTGGAA
GGCGAGCGCA ACCTGGTCAT CGACGCACCC GAAGCCGCCT TGTCGGTGGC GCTGGGCAAC
CTGATCGGCA ATGCGGTGAA GTACTCGCAG GATGGCGAAG TACGCGTGTT CGTCGGCACC
AATTCGGTGT CGGTGACCGA CAGTGGCCCG GGCCTGAGTG AGGAAGACGC GGCCAAGCTG
TTCCAGCGTG GCTACCGCGG CACCCATGCC GGCCACTCGC AGGGCGGAGG TATCGGCCTG
TCGATCGTCA GCCGCCTGTG CGATCTGTAC GGCTGGCAGG TGAGCGTGCG CCCCGGCGGC
GAACGCGGCG TGATCGCCAC CCTGACGTTC TCGCCGAAGC CGTTGTAA
 
Protein sequence
MASDTASPPR KPDSVAAKGE RRRTPYRRRL RSRIIVSFVL LGFCLTTLFA FATNWARLRV 
ENQLVEELMN RNIDEYARRY YEHPGHNPDA PVLQIKAYAY SKDKFDRVRE ERAQWAGFSD
GIHSVSGDEH GEAYSYKLAV RKTPDAWFFL AYDMTDSVRG GKQLNRALVL SVLVFSVLSL
VLGWWSASKV MKPVSDLAAR LRAYRGGTSD PEPLAPRFPD DEVGQLAQAL DDYSSRLTEV
VQRDREFNAD VSHELRTPLA VIRGATELLL TRPGLDEKVL QRLQRIQRAE QQCSDLIGAL
LLLSRNERGQ GTSNVARVAE QLLDAHRAQL GGKPLELLLE GERNLVIDAP EAALSVALGN
LIGNAVKYSQ DGEVRVFVGT NSVSVTDSGP GLSEEDAAKL FQRGYRGTHA GHSQGGGIGL
SIVSRLCDLY GWQVSVRPGG ERGVIATLTF SPKPL