Gene Smal_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3163 
Symbol 
ID6476134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3542173 
End bp3543048 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content64% 
IMG OID642732359 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_002029545 
Protein GI194366935 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.608891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTT TGATTAACAA GAACACCAAG GTGATCGTGC AGGGCTTCAC CGGCCAGCAG 
GGCACCTTCC ACGCCACTCA GATGATCGAG TACGGCACCC AGGTTGTTGG CGGCGTGACC
CCGGGCAAGG GTGGCACCAC CCACATCGAC CTGCCGGTCT TCAACACCGT TGCCGACGCC
GTGCAGAGCA CCGGCGCCAA CGCTTCGGTC ATCTACGTGC CGCCGCCGTA CGCGGCTGAC
GCGATCCTGG AAGCCGCTGC TGCCGGCATC AAGGTCATCG TCTGCATCAC CGAAGGCATC
CCGGTGCTGG ACATGCTGCG CGTCAAGAAC GTGCTGACCC GTTCGCATCC GGACACCGTG
CTGATCGGGC CGAACTGCCC GGGCGTCATC ACCCCGGGTG AGTGCAAGAT CGGCATCATG
CCGGGCCACA TCCACAAGCC GGGCAAGATC GGCATCGTGT CGCGTTCGGG CACCCTGACC
TATGAAGCGG TCAAGCAGAC CACCGAAGTC GGCCTGGGCC AGTCCACCTG CATCGGCATC
GGTGGTGACC CGATCAACGG CCTGAACTTC GTCGACTGCC TGAAGCTGTT CAACGAAGAC
CCGCAGACCG AAGGCATCAT CATGGTCGGC GAAATCGGCG GTGACGCCGA AGAAGCCGGC
GCCGAGTACA TCAAGCAGTT CGTGAAGAAG CCGGTTGTCG GTTTCATCGC CGGTGCGTCG
GCTCCGGCCG GCAAGCGCAT GGGCCACGCC GGTGCGATCG CCTCGGGCGG CAAGGGCACT
GCTGAAGGCA AGTTCGCTGC CATGGAAGCC GCTGGTGTTG TCACCGTCCG CTCGCCGGGC
GACCTGGGTG CTGCCATCGC CAAGCTGGTG AAATAA
 
Protein sequence
MSVLINKNTK VIVQGFTGQQ GTFHATQMIE YGTQVVGGVT PGKGGTTHID LPVFNTVADA 
VQSTGANASV IYVPPPYAAD AILEAAAAGI KVIVCITEGI PVLDMLRVKN VLTRSHPDTV
LIGPNCPGVI TPGECKIGIM PGHIHKPGKI GIVSRSGTLT YEAVKQTTEV GLGQSTCIGI
GGDPINGLNF VDCLKLFNED PQTEGIIMVG EIGGDAEEAG AEYIKQFVKK PVVGFIAGAS
APAGKRMGHA GAIASGGKGT AEGKFAAMEA AGVVTVRSPG DLGAAIAKLV K