Gene Smal_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3162 
Symbol 
ID6476133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3540317 
End bp3541951 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content68% 
IMG OID642732358 
ProductNAD synthetase 
Protein accessionYP_002029544 
Protein GI194366934 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0171] NAD synthase
[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGA TCCGCATCGC GATGGCGCAG TTCGACTTCC CGGTCGGCGA TGTCGCCGGC 
AACACCGAGC GCATCATCGA GATGATCGGC CAGGCGCGCG ACGAGTACGG CGCCGAGCTG
GTGATGTTCC CCGAGCTGGC GGTGAGTGGT TATCCGCCGG AGGACCTGCT GCTGCGCCCC
GGCTTCCTGT ACGAGTGCGA GCAGGCGATG ACCCGCATCG CGACTGCCTG CCGTGGCATC
ACCGCCGTGG TCGGCTGGCC GCAGGCGGCT GGTGCGGTGG TCTACAACGC CGCCAGCGTG
CTGCGCGATG GCTTGGTCGA GCAGACCTAC CGCAAGCGCG AGCTGCCCAA CTACGCGGTG
TTCGACGAGC GTCGCTACTT CGATGTCGAC CCGGACGGCG GCAGCTGCGT GTTCGAGGTC
AACGGCATTC CGGTGGGCCT GCTGATCTGC GAGGACCTGT GGTTCGCCGA GCCGCTGGCC
GACACCGTGC GCGAAGGTGC GCAGCTGGTG GTGGTGCCGA ATGCTTCGCC CTACGAGCGC
GGCAAGCACG CCCAGCGCGA CGCCGTGCTG GCCGCGCGTA CCCGCGAGAG CGGGGCGGCG
ATCGCCTATC TCAATGTGGT CGGTGGCCAG GATGCGCTGG TATTCGATGG TGCCTCGGTG
GTGGCCGATG GCGACGGCAC CGTGCACCCG GCCGCAGCGG CCTTCGTCGA CCAGTGGCTG
GTGGTGGAGT ACGACGGTGA AACCCGCCGC TTCCTGCCGC ACGTGTGGAT GGACGATGGC
GACGAGAGTA TGGACGCGCT GGCGTGGCGC GCAGTGACCC GGGGCATCCA GGACTACTGC
CGCAAGAACG GCTTCAAGAA GGTGTGGCTG GGCCTGTCCG GCGGCATCGA CTCGGCGATC
GTGCTGGCGA TGGCCGTGGA CGCGATGGGT GCCGAAAACG TCACCGCGGT GCGCCTGCCG
TCGCGCTATA CCGCTGGCCT GTCCAACGAC CTGGCCGCCG AACAGTGCCA GGCGCTGGGC
GTGAAGCTGG AAGCGGTGTC GATCGAGCCG GCATTCAAGG GCCTGATGGA ATCGCTGGCG
CCGATGTTCG AAGGCACCAC CCCGGACGTG ACCGAGGAAA ACCTGCAGTC GCGCAGCCGT
GGCGTGATCC TGATGGCGCT GGCCAACAAG TTCGGCGGAC TGCTGCTGAC CACCGGCAAC
AAGAGCGAGT ATGCGGTGGG TTACGCCACG ATCTACGGCG ACATGTGCGG TGGCTACGCG
CCGTTGAAGG ACCTGTACAA GACCGAGGTG TTCGGCCTGT CGAAGTGGCG CAACACCGTG
GGCGGTGCGC CGGTGATCCC GCCGGCCGTG ATCAGCCGCC CGCCGTCGGC CGAGCTGCGC
GAGAACCAGC TGGACCAGGA TTCGCTGCCG GCCTATGACG TGCTGGACGG CATCCTGTAC
CGCTACATCG ACCAGGAGCA GTCGCGCACG GAGATCGTTG CGGCCGGTTA CGACGCGGCC
GTGGTCGACC GCGTGCTGCG CCTGGTGCGC ATCAGTGAGT GGAAGCGGCA CCAGGCCGCA
CCGGGGCCGA AGGTCTCGCG GCGTGCGTTC GGCCGTGAGC GCCGTTACCC GATCAGCAAC
GGCTACAAGG GCTGA
 
Protein sequence
MASIRIAMAQ FDFPVGDVAG NTERIIEMIG QARDEYGAEL VMFPELAVSG YPPEDLLLRP 
GFLYECEQAM TRIATACRGI TAVVGWPQAA GAVVYNAASV LRDGLVEQTY RKRELPNYAV
FDERRYFDVD PDGGSCVFEV NGIPVGLLIC EDLWFAEPLA DTVREGAQLV VVPNASPYER
GKHAQRDAVL AARTRESGAA IAYLNVVGGQ DALVFDGASV VADGDGTVHP AAAAFVDQWL
VVEYDGETRR FLPHVWMDDG DESMDALAWR AVTRGIQDYC RKNGFKKVWL GLSGGIDSAI
VLAMAVDAMG AENVTAVRLP SRYTAGLSND LAAEQCQALG VKLEAVSIEP AFKGLMESLA
PMFEGTTPDV TEENLQSRSR GVILMALANK FGGLLLTTGN KSEYAVGYAT IYGDMCGGYA
PLKDLYKTEV FGLSKWRNTV GGAPVIPPAV ISRPPSAELR ENQLDQDSLP AYDVLDGILY
RYIDQEQSRT EIVAAGYDAA VVDRVLRLVR ISEWKRHQAA PGPKVSRRAF GRERRYPISN
GYKG