Gene Smal_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3126 
SymbolruvA 
ID6476026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3495754 
End bp3496347 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID642732322 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_002029508 
Protein GI194366898 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.735644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTC GACTGCGCGG CATCGTCGCC TACAAGGCGC CGCCGTGGCT GGTGGTGGAC 
GTGAACGGAG TGGGCTACGA GCTGGAGGCG CCGATGAGCA CCTTCTACGA CCTGCCCGAA
CTCGGCCGCG AGGTCACCCT GTACACCCAT TACTCGCAGA AGGAAGACAG CGTCTCGCTG
TACGGCTTCC TGCGCGAGGG CGAGCGGCGC CTGTTCCGCG ACGTGCAGAA GGTCAGCGGC
ATCGGCGCGA AGATCGCGCT GGCCGTGCTG TCCGGTGTCA CCGTCGAGGA GTTCGCGCGC
ATGGTCCAGG CTGGCGACAT CACCGCGCTG ACCCGCATCC CCGGCATCGG CAAGAAGACC
GCCGAGCGCA TGGTGCTTGA GCTGCGCGAC CGCGCTGCCC AGTTCGGTGC CGGTGGCGCG
CTGCCGACCG GCAGTGGCCC GGCCCCGGCT GATCCGCTGT CCGATGCCAC CGTGGCCCTG
CAGCAGCTGG GTTACAAGCC GGCTGAAGCG GCGCGGATGG CCCGCGAAGC CTTCAATGAA
GGTGATGAAG TGGCCATCGT GATCCGCAAG GCGCTGCAGT CGGCGCTGCG CTGA
 
Protein sequence
MIGRLRGIVA YKAPPWLVVD VNGVGYELEA PMSTFYDLPE LGREVTLYTH YSQKEDSVSL 
YGFLREGERR LFRDVQKVSG IGAKIALAVL SGVTVEEFAR MVQAGDITAL TRIPGIGKKT
AERMVLELRD RAAQFGAGGA LPTGSGPAPA DPLSDATVAL QQLGYKPAEA ARMAREAFNE
GDEVAIVIRK ALQSALR