Gene Smal_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3097 
Symbol 
ID6475996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3462920 
End bp3463870 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content69% 
IMG OID642732292 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002029479 
Protein GI194366869 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.829891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGCTG CCGTGGCCGT TATAGTAGCG GCCCTGCCAA CCACGCCTCA CGGATGTCCG 
ATGACCGTCC TTGTTTCCGG AGCGACCAGC CAGATCGGCC GGTTCCTGTT GCCGCGCCTG
CTGCAGGCGC ATGGCCAGGT CCAGGCGGTG AGCCGGCAGC CACAACCTGC GCAGGACGGC
GTGCAGTGGC TGTGCGGTGA TCTGGCTGCC GCGCTGGACA GCGTGCCATC TCCGTCCTGG
CAGGCCATCG CAAGCTTCGG TCCGTTGGAA GGATTGGCGC ACTGGCTGTC GCGGCAGGCC
TCGGCACCGG CTCGACGGGT CATCGCGACC AGTTCGATGA GCGTGCTGAG CAAGCAGGGC
TCGGCCCAGG CCGACGAACA GGGTGTGGTG GCGATGCTGC AGCGGGGCGA GCGTGGCCTG
ATCGAGCAGG CTGAACGGCT GGGCATGGAG TGGACGATCC TGCGACCGAC GCTGATCTAT
GGCGCGGGCA TCGATCGCAG CATCACCCCG ATCGTGCAGC GTGCCCTGCG CCTGCGCGTG
TTCCCGATTC CGCTGGCGGA TGGCCTGCGC CAGCCGGTAC ACGCCGACGA TATTGCGCGT
GCCGTACTGG CCGCCATCAC CACCGGCGCG GCGTCGGCGC GGGTGCTGGA GATCGGGGGC
GGTGAGCGCC TGCCATACCA TGCGATGTTC CGCCGCGTAC ATGCCAGTCT GGTGCAGCCG
ACGTTGGCGC TGCCGTTGCC GGCGGGTGCA CTGCGCGGGC TGGCGGCGGT GCTGCCGCGC
GCGCGCGGTC CGGTGTCGCG TCTGCAGCAG GACCTGATTG CGGACAACGG ACCACTGCAG
GCGCTGCTGG GCGTACATCC GCGGCCGTTC CAGCCCGATG CAGGCACGTG GCAACCGATG
AGTGCCACCC AGGCCCTGCA GCGGATCGCG GCGCATCCCG GCAACAGTTA G
 
Protein sequence
MFAAVAVIVA ALPTTPHGCP MTVLVSGATS QIGRFLLPRL LQAHGQVQAV SRQPQPAQDG 
VQWLCGDLAA ALDSVPSPSW QAIASFGPLE GLAHWLSRQA SAPARRVIAT SSMSVLSKQG
SAQADEQGVV AMLQRGERGL IEQAERLGME WTILRPTLIY GAGIDRSITP IVQRALRLRV
FPIPLADGLR QPVHADDIAR AVLAAITTGA ASARVLEIGG GERLPYHAMF RRVHASLVQP
TLALPLPAGA LRGLAAVLPR ARGPVSRLQQ DLIADNGPLQ ALLGVHPRPF QPDAGTWQPM
SATQALQRIA AHPGNS