Gene Smal_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2972 
Symbol 
ID6475719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3309983 
End bp3310711 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID642732167 
Productresponse regulator receiver protein 
Protein accessionYP_002029354 
Protein GI194366744 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.538919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000910386 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATGA CCCCGCGGGC CAGCCGGCCC CGCTTCCTGC TTGTCGAGGA CGACATCATC 
AGCCGCGGTT TTTTCAAAGC GGCGTTGGAA ACGTTACCGG CGGACGTGGA CACCGCAGAC
TCGTTGGCCA GTGCCCTGGC CAGCGCCGAG CCCGGCGCGC ATGATCTGTG GCTGATCGAC
GTCAACCTGC CTGACGGCAA CGGTGCGCAG TTGTTGCGCG AACTGCGCCG TTCACACCCC
GATACGCCGG CGTTGGCGCA TACCGCCGAC GGTGATACCT CCATTCATGC CCGCCTGCGC
GAGGCCGGGT TCAGCGACAC CCTGGTCAAG CCACTGGGCC GCGACCAGTT GCTGAAGGCC
GTGCGCCGCG CCCTGGTCAA CAGCCCCGCC GGGATCGTCA TGGCACAGGT GCCGGCGGCG
GTCGAGCTGC AGGTCCAGGA CTGGGATGAG ACGGCGGCGC TGGCCGCGCT CAATGGCCAG
CGCAACCATT TGATCGCCCT GCGCGAGTTG TTCCTGGCCG AATTGCCGGG CGTGCGCGAT
GCGGTCGAGC AGGCGGTGGA CCAGCACGAC GAGCGCCAGC TGCGCAGCCA GTTGCACCGG
TTGCAGGCCA GCTGCGGGTT CGTGGGCGCG GCACGTCTGG CCCGTGCGGT GCGCCAGTTG
CATCATGCGC CGGAGTCCGG TCAGGCCCAA GCGGGATTCC GCGCAGCGGT AGCTGCCCTG
CTGCATTGA
 
Protein sequence
MQMTPRASRP RFLLVEDDII SRGFFKAALE TLPADVDTAD SLASALASAE PGAHDLWLID 
VNLPDGNGAQ LLRELRRSHP DTPALAHTAD GDTSIHARLR EAGFSDTLVK PLGRDQLLKA
VRRALVNSPA GIVMAQVPAA VELQVQDWDE TAALAALNGQ RNHLIALREL FLAELPGVRD
AVEQAVDQHD ERQLRSQLHR LQASCGFVGA ARLARAVRQL HHAPESGQAQ AGFRAAVAAL
LH