Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2911 |
Symbol | |
ID | 6475658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3247483 |
End bp | 3248067 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732106 |
Product | Rare lipoprotein B |
Protein accession | YP_002029293 |
Protein GI | 194366683 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.398156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGAA TCCTGCTTGC CCTCGTTCTT GCCCTCGGCC TTGCCGGCTG CGGTTTCCAT CTGCGCAACA AGCTGATGCT GCCGACCGAT ACGGCACCGG TGAAGGTGGT TTCCACTGCG CCGTACAGCG AACTGGTCAA GCTGCTCAAC CGCAACCTGC TGGCGTCCGG CGCCAGGCTG GCCGATGAGG ACAGCAAGGA GCCCAGCACC CAGTTGCAGG TGCTGTCCGA ACGCTGGGGC GATCTGCCGA TTGCCATCGA CTCGCAGGGC CGTGCACAGG AATACAGCCT GCGCTATGCG GTGATCTTCA TCTTCCGCCG CGAGGATGGC AGCGATCTGG TGCCGCAGCA GGTGATCGAG CTGTCGCGCG ACTACGTGTC GCCGCCGACC GACGCCACCG GTACCACCAC CGAACGCGAA ATCCTGGCCA CCGAGCTGCG CCGGGAAATG TCCGCTTCGA TCATCCGCCG CATCGACAGC GTGGTCCGCG CCGAGATCGA GAAGGGTGGC AGCCTGTCTG CACCGAAGAC CCCGCCGGTC GAGGATGCGG TCCCGGCCGC TCCGGCCCCT GCAGTGAAGC ACTGA
|
Protein sequence | MTRILLALVL ALGLAGCGFH LRNKLMLPTD TAPVKVVSTA PYSELVKLLN RNLLASGARL ADEDSKEPST QLQVLSERWG DLPIAIDSQG RAQEYSLRYA VIFIFRREDG SDLVPQQVIE LSRDYVSPPT DATGTTTERE ILATELRREM SASIIRRIDS VVRAEIEKGG SLSAPKTPPV EDAVPAAPAP AVKH
|
| |