Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2771 |
Symbol | |
ID | 6477264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3091677 |
End bp | 3092438 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731960 |
Product | short chain dehydrogenase |
Protein accession | YP_002029154 |
Protein GI | 194366544 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA ACAACAAGAT CGCTCTCATC ACCGGTGCCA GTGCCGGCAT CGGTCGCGCC AGCGCGCTGC GCTTCGCTGC CGAAGGAGCA AAGCTGGTGC TCAACGCACG GCGGCCGGAG CCGCTGCAGG GACTGGCCGA ACAGATCCGC GCCGCTGGTG GCGAGGTGGT GGTGCATGCG GCGGATGTGG CTGATCCGGG CACGGCGCAG GCGCTGGTCG ATCTGGCCCA GCAGTCATTC GGCGGTCTGG ACATCGCACT CAACAATGCC GGCATGCTCG GGCCCGGTGT GCCGGCCGCG GAGTTCCCGG TGAACGCCTG GCGCGAAGTG ATGGCGACCA ATCTGGATGC CGCCTTCCAT GCGGCACGCG CGCAGTTGCC GGCACTGCTG GCGCGCGGCG GCGGCTCGCT GGTGTTCGTT GGCACCTTCG TCGGCCACAC CGTGGGCTTC CCGGGCATGG CGGCCTATGC GTCGAGCAAG GCCGGGCTGA TCGGCCTGAG CCAGGTGATC GCCGCCGAAT ACGGGGCGCG TGGCGTGCGT AGCAACGTGC TGCTGCCCGG TGGCACCGAT ACCGAGATGG GGCGGCAGGC GGCGCCTACG GGCGATGCGC GTGATTTCGT GCGCTCGCTG CACGCACTCA AGCGCATGGC CGAGCCGGAG GAGATCGCCA ACGCGGCGCT TTTCCTGGCC AGCGATGAAA GCAGTTTCGT CACCGGTACC GCGATGCGCG TGGAGGGTGG CGTGTCGATC ACCCGTACCT GA
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Protein sequence | MRLNNKIALI TGASAGIGRA SALRFAAEGA KLVLNARRPE PLQGLAEQIR AAGGEVVVHA ADVADPGTAQ ALVDLAQQSF GGLDIALNNA GMLGPGVPAA EFPVNAWREV MATNLDAAFH AARAQLPALL ARGGGSLVFV GTFVGHTVGF PGMAAYASSK AGLIGLSQVI AAEYGARGVR SNVLLPGGTD TEMGRQAAPT GDARDFVRSL HALKRMAEPE EIANAALFLA SDESSFVTGT AMRVEGGVSI TRT
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