Gene Smal_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2746 
Symbol 
ID6477238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3063522 
End bp3064292 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID642731934 
ProductRNA methyltransferase, TrmH family, group 1 
Protein accessionYP_002029129 
Protein GI194366519 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.504131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.782476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGT TTCCCGTCGC CACCCGCCTC CGATTCGTCC TGGTCGGCAC CCAGCACCCC 
GGCAACATGG GCGCCGCCGC CCGTGCCCTG AAGACCATGG GCCTGGCCCG CCTGGTGCTG
GTCGCGCCCG AAAAGCCATT GGACGAGGAG GCCTTCCGCC GCTCGGCCGG TGCCGAAGAC
GTACTCGGTG ACGCCCCGGT GGTGGCCACC CTGGCCGAGG CCGTGGCCGA CTGCCGCCTG
GTGCTGGGCT GCACTGCCCG TGCCCGCCGC GTCCAGCTGG AGGAATACCT GCCCGCCGAC
GCCGCTGCCC GCGCGGTGGC CAAAGCCGGT GAAGGCGCCG AGGTGGCGCT GGTATTCGGT
CGCGAGCGCA CCGGGTTGAC CAATGAAGAG CTGCAGCTGT GCCACGCGGC GGTGCACATC
CCGTCCGATC CGGAGTTCAG CTCGCTCAAC CTGGCGGCGG CCGTACAGGT CCTGGCCTAT
GAAACCCGCA TGCAGCTGCT TGGCGCACAG CCGGTGGTTG AGTCCGGGAC CGGCGTCCGC
GAACCGGTGG CCAGCCATGA GCAGATGGAG AGCTTCTTCG CCCAGCTCGG CGACACCCTG
GACGAGATCG ATTTCCACAA GGGCCGCGCG CCCGAATCGG CGATGCGCAA GCTGCGCCGC
CTGTTCCTGC GCAGCGAGCC GAGCGAGCAG GAAGTGCGCC TGTTGCGCGG CATCCTCGCC
GACACCCAGC GCATGGCGCG GCTGGCCCAG GCGGGCAACA AGGACAGCTG A
 
Protein sequence
MSQFPVATRL RFVLVGTQHP GNMGAAARAL KTMGLARLVL VAPEKPLDEE AFRRSAGAED 
VLGDAPVVAT LAEAVADCRL VLGCTARARR VQLEEYLPAD AAARAVAKAG EGAEVALVFG
RERTGLTNEE LQLCHAAVHI PSDPEFSSLN LAAAVQVLAY ETRMQLLGAQ PVVESGTGVR
EPVASHEQME SFFAQLGDTL DEIDFHKGRA PESAMRKLRR LFLRSEPSEQ EVRLLRGILA
DTQRMARLAQ AGNKDS