Gene Smal_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2417 
Symbol 
ID6476907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2719327 
End bp2719941 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID642731605 
ProductCDP-diacylglycerol/serine O-phosphatidyltransferase 
Protein accessionYP_002028803 
Protein GI194366193 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0509991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.421387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC ACTTCTCGAT GCTGCGCGAA TTCCAGCTGG CCGACTGGTT CACCCTGGCC 
AATGCTTTCT GCGGCACCGG TGCCGTCTTC GCTGCGATGC GCTTCCTGCA GGACGGCGAG
CGCGGCTATC TGCTGTTCGG CATGGCGCTG ATCCCGCTGG CCTTCATCTT CGATGCCCTC
GACGGGCACA TCGCGCGCTG GCGCAAGTCC AGCTCCACCC TGGGCCGTGA GCTGGACTCG
CTGTCCGATG TGATCTCCTT CGGTGTGGCG CCGGCGGCGC TGGCCTATGC CTGCGGCATG
CAGGGCGGCT GGGACTGGCT GGTGCTGAGC TACTTCGTCT GCTGTGGTGT CAGCCGCCTG
GCCCGCTACA ACGTCACCGC CGAGGCACTG GCCGGCGACG AGGGCAAGGT CAAGTATTTC
GAGGGCACGC CGATCCCGAC CAGCCTGCTG CTGGTGATCG TGCTGGCCAT CGCCGCCGGC
ACCGGCGCCA TCGGCCAGGA CATCTGGTTC GGCCAGTGGC AGATCGGGCC GTGGCAGCTG
CACCCGATGG TGCTGCTGTT CGCCCTGTCC GGGTCGCTGA TGATCAGCAA GACCCTGCGC
ATCCCCAAGC CATGA
 
Protein sequence
MKRHFSMLRE FQLADWFTLA NAFCGTGAVF AAMRFLQDGE RGYLLFGMAL IPLAFIFDAL 
DGHIARWRKS SSTLGRELDS LSDVISFGVA PAALAYACGM QGGWDWLVLS YFVCCGVSRL
ARYNVTAEAL AGDEGKVKYF EGTPIPTSLL LVIVLAIAAG TGAIGQDIWF GQWQIGPWQL
HPMVLLFALS GSLMISKTLR IPKP