| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2346 |
|---|
| Symbol | |
|---|
| ID | 6476829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2638438 |
|---|
| End bp | 2639319 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642731527 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002028732 |
|---|
| Protein GI | 194366122 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.886093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACA GTGCCAAATT GAATAGAACC CTGTTCGAAC TGGACCTGCT GCGTGCGCTG
GTGATGGTGG CCGACTGCGG CAGCTTCACC ACTGCGGCCA CGCGCCTGCA TTCGACCCAG
TCCACCGTCA GCCAGAAGGT GCGCCGGCTG GAGGAACTGG CCGCGCATCG CCTGCTCGAA
CGCGGCCACC GCGACGTACA CCCCACCGAC GCCGGTCACA CCCTGCTTGG CTACGCGCGG
CGCATGCTCG ACCTGAACGA GGAAATGGCA CAGGCGTTGG CCGGCGCCAC CGTGGAAACC
GCGGTGCGCA TCGGTGTCCC CGAGGACTTC GTCAACGCAC AGACCACACG CATGCTGGCC
GCTTTCAGCC GCCGCCATCC ACAGGTGAAA CTGGAGATCA GCAGCGGCCT CAGCCGCGAC
CTGGCCCACG GCTTCGACCA CGGCGAGCTG GACCTGGTGC TGGTCAAGCA ACGCCGCAAC
ACCCGCCAGG CGGTGCACTG CCGACGCGAG CCGATGCATT GGATCGATAG CCTGCGCAGC
AGTTGCCTGC TGCAGGACCC GCTGCCGCTG GTCACCTTCC CGCCGCGCGG ACTGTACCGC
GACGAGATGA TCCACGCCGT GGAGGCGCTG GGCCTGCGCT GGCGCATCGC CTTCACCAGT
TCGTCGCTGA GTGGCATCCA GGGTGCGGTG GCCGACGGCA TCGGCATCAG CCTGCTGCCG
CGCCGCGCAG TCACCCGCGA ACACCGCATC ATCGATGGCG AGCGCGACCT GCCGGTGATC
GACAATTACG AGATCGGCCT GCTGCATCGC TCCGATGCCG ATGATGCCGT GCGAGCGCTG
GCCAGCGAAC TGTGGCGGCA GGTGCAGCGC GAACCGGATT GA
|
|---|
| Protein sequence | MQDSAKLNRT LFELDLLRAL VMVADCGSFT TAATRLHSTQ STVSQKVRRL EELAAHRLLE
RGHRDVHPTD AGHTLLGYAR RMLDLNEEMA QALAGATVET AVRIGVPEDF VNAQTTRMLA
AFSRRHPQVK LEISSGLSRD LAHGFDHGEL DLVLVKQRRN TRQAVHCRRE PMHWIDSLRS
SCLLQDPLPL VTFPPRGLYR DEMIHAVEAL GLRWRIAFTS SSLSGIQGAV ADGIGISLLP
RRAVTREHRI IDGERDLPVI DNYEIGLLHR SDADDAVRAL ASELWRQVQR EPD
|
|---|
| |