Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2032 |
Symbol | |
ID | 6476210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2278901 |
End bp | 2280607 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731214 |
Product | PTS system, fructose subfamily, IIC subunit |
Protein accession | YP_002028419 |
Protein GI | 194365809 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR01427] PTS system, fructose subfamily, IIC component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGCTT CCACCGTAGT CATCGCCGCT GGCGAACGCA GCATCGAGGC GGTTCTTGCC GCCGAAGCGC TGCGCCGCGC CGCCCGCCAG CAAGGGCTCG AACTGGCGAT CGAAATCCGC AGCGACCAGG GCGTGACCGG TGCACTGCCC GCCACGCACG CCGCCGCCGC AACGCAGCTG CTGCTGGTGG GGGACGGTGA GGCGGATGCC GCGCGCTTCG GCAATGCCCA GGTCGTGCGC GCCAGCCTCG GTGAAGTGCT GGACGACCCG CTTGCCGCGC TGGCGCTGCT CGCAGCGACA TCAGCAACCG CTTCCACCGC GGACGCCGGC AAGCGCATCG TCGCCGTCAC CTCCTGCCCG ACCGGCATCG CCCACACCTT CATGGCAGCC GAAGGGTTGC AGCAGGCCGC CAAGGCATTG GGCCACGCGA TCCGGGTGGA AACCCAGGGC TCGGTTGGCG CGCAGGACGC GTTGAGTGAC GAAGAAATCG CTGTCGCCGA CCTGGTATTG ATCGCCGCCG ACCGCGAAGT CGATCTTTCG CGCTTCGCTG GCAAACGCCT GTTCAAGAGC GGCACCAAGC CGGCGATCAA CGATGGCCAG AATCTGATCC GCAAGGCACT GGCCGAGGCC GGCGTGCAAA CCGGCACGGC ATCTTCAGGC CGTGCGACCG AAAAGACCAA GGTCACCGGC CCCTACAAGC ACCTGATGAC CGGCGTGTCG TTCATGCTGC CGTTCGTCAC TGCCGGTGGC CTGCTGATCG CACTGGCGTT CGCGCTCGGC GGCATCTATG CCTTCGACGA TGCACACAAG GGCACGCTGG CCTGGTCGCT GTTCCAGATC GGCGCCAAGT CCGGCTTCAT GCTGATGGTG CCGGCACTGG CCGGTTACAT CGCCTACTCC ATCGCCGATC GCCCGGGTAT CGCGCCGGGC ATGATCGGCG GACTGGTGGC AGTCAACATG GATGCGGGCT TCATCGGCGG TATCCTGGCT GGCTTCATCG CCGGCTACGG CGTGCACTGG ATCAACCGTG CGCTGCGCCT GCCGCGTAGC CTGGAAGGCC TCAAGCCGGT ATTGATCCTG CCGGTGCTGG GCACGCTGCT GGTTGGCCTG TTGATGATGT ACGTGATCGG TACGCCGGTT GCCGGACTGC TGGCCTGGCT GACCGACTGG TTGCGCGGCA TGCAGGGCAG CAGCGCGATC CTGCTCGGCC TGCTGCTGGG CGGAATGATG GCGGTGGATA TGGGCGGGCC GGTCAACAAG GCCTCCTATG CATTCTCCAC CGCACTGATT TCCAGCCAGG TCTACACGCC GATGGCTGCG ACGATGATCG GCGGCATGAC GCCGCCGCTG GGCATTGCGC TGGCAACGTG GTTGTTCAGC AACCGCTTCA CTGCCGAGGA GCGCGGCACG GCCGGTGCCG CGGGCGTGCT CGGCCTCAGC TTCGTGACCG AGGGTGCGAT CCCTTACGCC GCGCGCGATC CGCTGCGCAC CATTCCAGCG CTGATCCTCG GCTCTGCCGT GGCTGGTGCG ATCTCGATGG CCGCAGGCGT CGAGCTGAAG GTGCCGCACG GCGGGGTGTT CGTGCTGCCA ATCCCGAATG CGGTCACCCA CCTTGGCATC TACCTGCTGG CGCTGGTGGC CGGCGTGGCC GTCACCGCGG TCGCGCTACG CGTCCTCAAG AAGCCGGTCA CGGCTCCCAC CCTGTAA
|
Protein sequence | MQASTVVIAA GERSIEAVLA AEALRRAARQ QGLELAIEIR SDQGVTGALP ATHAAAATQL LLVGDGEADA ARFGNAQVVR ASLGEVLDDP LAALALLAAT SATASTADAG KRIVAVTSCP TGIAHTFMAA EGLQQAAKAL GHAIRVETQG SVGAQDALSD EEIAVADLVL IAADREVDLS RFAGKRLFKS GTKPAINDGQ NLIRKALAEA GVQTGTASSG RATEKTKVTG PYKHLMTGVS FMLPFVTAGG LLIALAFALG GIYAFDDAHK GTLAWSLFQI GAKSGFMLMV PALAGYIAYS IADRPGIAPG MIGGLVAVNM DAGFIGGILA GFIAGYGVHW INRALRLPRS LEGLKPVLIL PVLGTLLVGL LMMYVIGTPV AGLLAWLTDW LRGMQGSSAI LLGLLLGGMM AVDMGGPVNK ASYAFSTALI SSQVYTPMAA TMIGGMTPPL GIALATWLFS NRFTAEERGT AGAAGVLGLS FVTEGAIPYA ARDPLRTIPA LILGSAVAGA ISMAAGVELK VPHGGVFVLP IPNAVTHLGI YLLALVAGVA VTAVALRVLK KPVTAPTL
|
| |