Gene Smal_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1986 
Symbol 
ID6476093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2227837 
End bp2228592 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID642731168 
Productputative transmembrane protein 
Protein accessionYP_002028373 
Protein GI194365763 
COG category[S] Function unknown 
COG ID[COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.878282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTATA TCGGAATCGG ACTCCACGTA CTGGCGGCCA TCTACTTCGC GGTGCACGCC 
ATCCGCTCGG GCCAGAGCCT CTATTGGCTC ATCCTGCTCT TCTCGTTCCC GCTGCTGGGC
AGCGTCGTCT ACTTCCTGGC GATCTACTTC CCGGAAGCCC GCAACTCGCG CGGCGCGCGG
CAGGCAATCC GCTCCGCCAA GCAGCTCATT GACCCGGGCC AAGACCTGCG TAACGCACGC
GCTGATCTGT CGCGAACGCC CACCGTGCAG AACCGGGTTC GTCTTGGCAT GACGCTGCTG
GATGCCGGCC AGGCGGAGGA AGCCAGAGCT CTGCTTGAGC AGGCGGCCAG CTCGCCGCTG
GGCGACGATC CCTACATTCT TACCGGCCTC GCGCGTGCCC ACCTTGAGTC CGGGCACGCC
GCACTTGCAG TCGAGACGCT GGACGGCCTG TTCGCCCGCC ACTCGGACGT GCGCCGCAAG
CCGGAACAGA CCCTGCTCCA TGCACAGGCA TTGGCCGCCA CCCAGTCGCC CGACGCCCGC
GCCGCGTTCG AGCGCGCTGT GGAATGCGGA AACGATGCGG CCGCCCGCTG CCTGTACGCC
GAATGGCTGA TGGCACAACC GCAGCCCGCC GACCGCGAGC AGGCCCGCAG CCTGTTCGCC
AGCATCATCG ACGATGCCCA GCACTGGTCG CGCCATGCGC GCAGCCACAA TGCCGCGTGG
CTGGAGCGGA CCAAGGTCGC GTTGAAGGGC TACTGA
 
Protein sequence
MPYIGIGLHV LAAIYFAVHA IRSGQSLYWL ILLFSFPLLG SVVYFLAIYF PEARNSRGAR 
QAIRSAKQLI DPGQDLRNAR ADLSRTPTVQ NRVRLGMTLL DAGQAEEARA LLEQAASSPL
GDDPYILTGL ARAHLESGHA ALAVETLDGL FARHSDVRRK PEQTLLHAQA LAATQSPDAR
AAFERAVECG NDAAARCLYA EWLMAQPQPA DREQARSLFA SIIDDAQHWS RHARSHNAAW
LERTKVALKG Y