Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1986 |
Symbol | |
ID | 6476093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2227837 |
End bp | 2228592 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731168 |
Product | putative transmembrane protein |
Protein accession | YP_002028373 |
Protein GI | 194365763 |
COG category | [S] Function unknown |
COG ID | [COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.878282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTATA TCGGAATCGG ACTCCACGTA CTGGCGGCCA TCTACTTCGC GGTGCACGCC ATCCGCTCGG GCCAGAGCCT CTATTGGCTC ATCCTGCTCT TCTCGTTCCC GCTGCTGGGC AGCGTCGTCT ACTTCCTGGC GATCTACTTC CCGGAAGCCC GCAACTCGCG CGGCGCGCGG CAGGCAATCC GCTCCGCCAA GCAGCTCATT GACCCGGGCC AAGACCTGCG TAACGCACGC GCTGATCTGT CGCGAACGCC CACCGTGCAG AACCGGGTTC GTCTTGGCAT GACGCTGCTG GATGCCGGCC AGGCGGAGGA AGCCAGAGCT CTGCTTGAGC AGGCGGCCAG CTCGCCGCTG GGCGACGATC CCTACATTCT TACCGGCCTC GCGCGTGCCC ACCTTGAGTC CGGGCACGCC GCACTTGCAG TCGAGACGCT GGACGGCCTG TTCGCCCGCC ACTCGGACGT GCGCCGCAAG CCGGAACAGA CCCTGCTCCA TGCACAGGCA TTGGCCGCCA CCCAGTCGCC CGACGCCCGC GCCGCGTTCG AGCGCGCTGT GGAATGCGGA AACGATGCGG CCGCCCGCTG CCTGTACGCC GAATGGCTGA TGGCACAACC GCAGCCCGCC GACCGCGAGC AGGCCCGCAG CCTGTTCGCC AGCATCATCG ACGATGCCCA GCACTGGTCG CGCCATGCGC GCAGCCACAA TGCCGCGTGG CTGGAGCGGA CCAAGGTCGC GTTGAAGGGC TACTGA
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Protein sequence | MPYIGIGLHV LAAIYFAVHA IRSGQSLYWL ILLFSFPLLG SVVYFLAIYF PEARNSRGAR QAIRSAKQLI DPGQDLRNAR ADLSRTPTVQ NRVRLGMTLL DAGQAEEARA LLEQAASSPL GDDPYILTGL ARAHLESGHA ALAVETLDGL FARHSDVRRK PEQTLLHAQA LAATQSPDAR AAFERAVECG NDAAARCLYA EWLMAQPQPA DREQARSLFA SIIDDAQHWS RHARSHNAAW LERTKVALKG Y
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