Gene Smal_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1973 
Symbol 
ID6476080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2214814 
End bp2216661 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content58% 
IMG OID642731155 
Producthypothetical protein 
Protein accessionYP_002028360 
Protein GI194365750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0627643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCTG ACGCTATCAC CTATTGTCTA GAGCAGCTCT CGGATTACAG ACAATTCGAG 
CGACTGTGCT CCGCACTTCT CGCCAGCGCA GGCTATTCAA CAATCGACCC TCTAGGTGGT
ACCGGAGATG AGGGGCGCGA CGCAATTATT CGTGCTGACT CTGCAGGGCG CACAATTTGC
TTTGCCTACA CCGTACGCGC CGATTGGCGT ACGAAGCTCC GCAGCGACTG CAATCGCGTC
AGAGACGCCG GTCATACGCC TGATGTCTTT GTCTTTGCCT GCACAGAAGT CATTGCCGCG
AGAGACAAGG ACGCAGCAGT GAAGATCGTT AAAGACGAGT TCGGCTGGCG ACTCGACCTA
TTTGATCTTG AGCGGCTTCG CGTTCAACTT TCCGGGTCGC AACGCCACTT GCTAGCACAG
CACCCTTCCA TCTTTGTACC CCCGTTTTTC CCTCAGCGGG GTGGAGAATC CATCGTCTCT
AGCCACGATA CGATCCTCAT CGATCACGTC ACTTCGGACC ATGCGATCGC CGCCTGGCTT
TCTAGGCGTC TGTCCCTGTC AGGGTTTCGT ACCTGGTGTC GCGGTACGGC ACCTTTAGCT
GGAGAAGACG CGGACGAGAC GGTGAGGACG CTTATTGCCC AACGTGCGCA GCGCTACCTC
CCGGTTTTCT CCAGCGCGAG CTTGGCCGAC CCGGTGTTTC TGGAACGCTG TGCGATAGCG
ACAGCGCGCA GCCCGGACTT CGTGATTCCC TGCAAGGGAA TCATTTCGGA GGATTGGGTC
ATGCCCTCAC GCCTGAACAA GCTGGTCGCG GCTGATTTCT CGTCGTCATG GCGCGAAGGT
CTTAGTGCTG TGCTCGACTC CTTGTCCTCG TCCGGCATCG GGCCTTCACT GGCTGCCGAG
CGCGGCGCGC AAATCGCGTT GCGCGACTTT CTGCCATCGC AGGTGACGAT CGCCAAGCCA
GAGCCAGTCT TCGCCAACGT CTTCGCCATG ACTGTACCCT CCAGCATGCT CGACATCAGG
TTGCCGCGTA CACTGACGAT GGTCGAGCGC TATGAATTAT CAAGGAAATG GGCGTTCTAC
ATCGCCAACG AGCTGACGGT GATCGCCTTC GACCTTCCTC CTTCTGATTC ACCTCTTGGC
GACGTGAGCG GTCGGTATTC GGAGTTCTCA TGGCGGGATG CCGGGCACAT ACATGGACAC
CCCACGATTA ACGTCGCCAA GTCCCTGTTG CGTCGCACCC TAGATGTAGC CTGTGAGGCC
AAAGGATTGG TGTTCTGCCA CGACCGGAGG GGATATCACT TTTGCCGCGA CGGAGCTCAG
GAGTGCACGC AGGCCATTAC ACATGTCGAC GGACAGAAGA CTACCGTTCA GCTCACGGGA
AAACGCACCA AAGGCTATGG TGAACGCGCC TCGGAGTTTC GTTATCAGCT AGGCCCGCGA
TTCCGCTGCG ATCAAGACCA GCAGGGACAT TGGACCGCTG TCATCAGACT CTACGTCAGG
GTCACCACAC TCGAAGGTGC GATCTTCGAA GGCAAGGAGA TTAACCGGCG GAGGAAAATG
GTGACCAAAT CCTGGTGGAA CAAGCAATGG CTTGCCCGTC TACTCGGAGT CGTGCAGGGG
CTGGAGACCC AACCCGGCAA GGTATCGGTC GGTCATGGCC ACAGAGCCGT GACCATGACC
ACGGCGCCGA TGCGATGGGA GTGTCCGGTC GGCCTGGATG TCTCTGCATT AGCTGATGCA
ATTGAGGCGG GTCAGGAGAT GGCGCTTTAT CGCGAGCATC AGGATGTCGA AGACGATACA
GACGACGTCG GAATATCCAA CTCTGCTGCT TTAGGGGCGG CATTATGA
 
Protein sequence
MSADAITYCL EQLSDYRQFE RLCSALLASA GYSTIDPLGG TGDEGRDAII RADSAGRTIC 
FAYTVRADWR TKLRSDCNRV RDAGHTPDVF VFACTEVIAA RDKDAAVKIV KDEFGWRLDL
FDLERLRVQL SGSQRHLLAQ HPSIFVPPFF PQRGGESIVS SHDTILIDHV TSDHAIAAWL
SRRLSLSGFR TWCRGTAPLA GEDADETVRT LIAQRAQRYL PVFSSASLAD PVFLERCAIA
TARSPDFVIP CKGIISEDWV MPSRLNKLVA ADFSSSWREG LSAVLDSLSS SGIGPSLAAE
RGAQIALRDF LPSQVTIAKP EPVFANVFAM TVPSSMLDIR LPRTLTMVER YELSRKWAFY
IANELTVIAF DLPPSDSPLG DVSGRYSEFS WRDAGHIHGH PTINVAKSLL RRTLDVACEA
KGLVFCHDRR GYHFCRDGAQ ECTQAITHVD GQKTTVQLTG KRTKGYGERA SEFRYQLGPR
FRCDQDQQGH WTAVIRLYVR VTTLEGAIFE GKEINRRRKM VTKSWWNKQW LARLLGVVQG
LETQPGKVSV GHGHRAVTMT TAPMRWECPV GLDVSALADA IEAGQEMALY REHQDVEDDT
DDVGISNSAA LGAAL