Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1950 |
Symbol | |
ID | 6476057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2193737 |
End bp | 2194270 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642731132 |
Product | Lipocalin family protein |
Protein accession | YP_002028337 |
Protein GI | 194365727 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.100956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0832884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTT TTCCGCTGCT TCCTCTGCTC GCAGTCGGCC TGTTCGGCGC AGGCTGCAGT TCCAGCGACA CCCGGCCCCT GCCGCGGCCA CCATCAGTGG ATGTGCCGCG ATTCATGGGC GACTGGTATG TGATCGCACA CATTCCATCG CGCCCGGAAC GCGAGGCCTT CGATGCGGTG GAAAGCTACG CGCTACGGCC GGATGGACGC ATCCAGACCA CCTTCACCTA TCGCAAGGGC AGCTTCGATG CCCCACAGAA GTCGATGCAT CCGATCGGCC GGGTGGAGAA AGAAGGAAAC GGTGCGATCT GGGGCATGCA GTTCATCTGG CCGATCCAGG CCGAATACAT CATCGCCTGG CTCGATGATG GCTACCGCCA GACCATTGTG GCCCGCAGCA AGCGCGACTA CGTCTGGTAC ATGGCGCGTA CGCCCCAGGT CTCGGAAAGC GACTACCAGC AGGCGGTGCA GCGCATTGCA GCGATGGGTT ACGACACTGC CAGGTTGAGG CGGGTGCCGC AGTCGGTCCG CTGA
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Protein sequence | MRIFPLLPLL AVGLFGAGCS SSDTRPLPRP PSVDVPRFMG DWYVIAHIPS RPEREAFDAV ESYALRPDGR IQTTFTYRKG SFDAPQKSMH PIGRVEKEGN GAIWGMQFIW PIQAEYIIAW LDDGYRQTIV ARSKRDYVWY MARTPQVSES DYQQAVQRIA AMGYDTARLR RVPQSVR
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