Gene Smal_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1945 
Symbol 
ID6476052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2187210 
End bp2189246 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content69% 
IMG OID642731127 
Producttranslation elongation factor G 
Protein accessionYP_002028332 
Protein GI194365722 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.92127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0790932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC AAGTCCTTTC CCGCCGTCGC AACCTCGGCA TCATTGCCCA CATCGACGCC 
GGCAAGACCA CGCTGACCGA ACGCCTGCTG TGGAAAAGCG GCGAGATCCA TCGCGTCGGC
GAAGTGCACG ACGGCAATGC GACCACCGAT TTCTCGGCGA TCGAGCGCGA ACGTGGCATC
ACCATCGGCG CCGCCGCCGT GCAGGCGCAG TGGGCGCCGC GCGACCTGCC GCCGCATCGG
CTGACCCTGA TCGACACTCC CGGCCACATC GACTTCGCCA TTGAAGTTGA GCGTTCGCTG
CGCGTGCTCG ACGGAGCCGT GGCTGTGTTT TCGGCCGTGG ATGGAGTGCA GCCGCAGTCG
GAAACCGTGT GGCGCCAAGC GCGTCGCCAT CGCGTGCCGC TGATCGCGTT CGTCAACAAG
ATGGACCGCG TCGGCGCTTC GTTCGAGCGC GTGCTGGAGC AGCTGCAGGA CAAGCTGAGG
GCGCGGCCGT GGGCGCTCGG CGTGCCGTTG GGCAGCGAAA GCGACTTCAA CGGCTGGGTC
GACCTGGTCG ATGAGCGCGT GCTGCAGTGG CAGGATGGCG CCGCAACCAC GGTGACCCCG
TGGGACGACG CGGCGCGCAC CCTGTGGCAG CCGCAACGCG ACGCACTGGT CGAGGCCGTG
GCCGACCACG ACGAACTGCT GGCTGATGCC TGGCTGGAGG GTCGCGTGAT CGATGCGGAA
CTGCTGCGGG CGGCGATCCG ACGGGCGACG CTGGCCGGTG CAGGCGTGCC GGTGCTGGCC
GGTGCCGCGT TCAAGGACAA GGGCATCGAG ACGCTGCTGG ATGCGGTGGT CGATTACCTG
CCGTCGCCGC TGGATCGCCC TGCCGTGACC GCCGAAAGCG AAGGTGGTGA CGTGGTGTTG
CCGCCGGATC CGGACGGTCC GCTGGCCGGC CTGCTGTTCA AGATCACCCA CCAGCAGCAC
GGCGCGCTGA GCTTCGTGCG GCTGTACTCG GGCACCTTGA AGGTCGGCGA TGCGGTGGCC
AGTTCGCAGC ATCCGCAGGG GCGGCGTGTC AGCCGCCTGG TGCGGGTGCA GGCCGACCAG
ACCCATGACA TCGAGCAGGC CGTGGCCGGT GACATCGTCG CGGTGCTGGG CTGGAAGGAT
GCGGTCAGCG GTGAAACGCT GAGCGACCGC GCGCAGCCGC TGCGCCTGGA GAGCATCCAG
GCACAGGCAC CGGTGCTGGC GTGGCGGCTG GAACCGGCGC GCGCGGCCGA CCTGATCCGG
ATGGCGCAGG GCCTGGCCAG CCTGGCCCAG GAAGATCCGT CGTTCCGCGT CGAGACCGAT
CGCGACACGG CGGAGACCCT GGTCTGGGGC ATGGGCGAGT TGCACCTGGA GGTGATGGTC
GAGCGTCTGC GCAGCGAATG GAAGGTCGAC GTAGGCGTAG GTGCGCCGCG TGTGGCCTAC
CAGGAAACGC CGATGCGTGC GATGGCCGGG GTTGTGGGCC GGCTGGTCAA GCAGACCGGT
GGCCAGGGCC AGTTCGCGCA CGTGGTGCTG GATGTGTCGC CGCGCGAGGA CGGCCAGGTG
GTGTTCAACG ACCGCATCGT CGGTGGCGTG GTACCGCGCA GCTTCATCAA CGCCGTGGAG
AAGGGCGTGC GTGCGGCGCT GTCGGAAGGC CCGCAGGGCC ATCCGGTGGT CGGTATCGAG
GTCAGTCTTG TCGATGGCCA GACCCACGCC AAGGACTCTT CGGAAATGGC GTTCCATCGC
GCCGGTGCCG AGGCGATCAA GGCGGCGCTG GCCGAGGGTG GCACGCAGCT GCTGGAGCCG
GTAATGGCGG TGACGGTGCA TTCGCCATCG GCGTCGGTGG GTGATGTGGT GGGCGACCTC
AACCGTCGCC ATGGCCGTAT TGCCCGCATC GAAGACCAGG AAGGTCGCGC CGAAGTCAGC
GGCTTTGCGC CGCTGGCGCA GCTGGTGGGC TACACCACTG CACTGCGTTC GCTCAGCCAG
GGTCGGGCGA GCAGCGAGGC GCACCTGCAC GGCTACGAGC CGGTACGCGC TGCGTGA
 
Protein sequence
MNTQVLSRRR NLGIIAHIDA GKTTLTERLL WKSGEIHRVG EVHDGNATTD FSAIERERGI 
TIGAAAVQAQ WAPRDLPPHR LTLIDTPGHI DFAIEVERSL RVLDGAVAVF SAVDGVQPQS
ETVWRQARRH RVPLIAFVNK MDRVGASFER VLEQLQDKLR ARPWALGVPL GSESDFNGWV
DLVDERVLQW QDGAATTVTP WDDAARTLWQ PQRDALVEAV ADHDELLADA WLEGRVIDAE
LLRAAIRRAT LAGAGVPVLA GAAFKDKGIE TLLDAVVDYL PSPLDRPAVT AESEGGDVVL
PPDPDGPLAG LLFKITHQQH GALSFVRLYS GTLKVGDAVA SSQHPQGRRV SRLVRVQADQ
THDIEQAVAG DIVAVLGWKD AVSGETLSDR AQPLRLESIQ AQAPVLAWRL EPARAADLIR
MAQGLASLAQ EDPSFRVETD RDTAETLVWG MGELHLEVMV ERLRSEWKVD VGVGAPRVAY
QETPMRAMAG VVGRLVKQTG GQGQFAHVVL DVSPREDGQV VFNDRIVGGV VPRSFINAVE
KGVRAALSEG PQGHPVVGIE VSLVDGQTHA KDSSEMAFHR AGAEAIKAAL AEGGTQLLEP
VMAVTVHSPS ASVGDVVGDL NRRHGRIARI EDQEGRAEVS GFAPLAQLVG YTTALRSLSQ
GRASSEAHLH GYEPVRAA