Gene Smal_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1838 
Symbol 
ID6475791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2071518 
End bp2071916 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID642731020 
Producthypothetical protein 
Protein accessionYP_002028225 
Protein GI194365615 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0778721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.378658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG TTGATTCACC GGTGCTGGTC GAGCTGCTCA GCAATGGTCC GCAGGCCGAT 
GCCGTGGAAG CCATCCTCAG GCAGAGCCTG GTCGGTGGCC GCGTGGTGGT CTGTGGCGCG
ACCCTGGCCG AGGTCTGCGC ATCGCTGCGC GGCGGCGCCG AGGTGCTCGA AGCGCTGGAA
GAAATGGGCG TTCACTTCAA CCCGATGGAA GCCAAGTCGG CGCTGCGCGC CGGCGAGATG
CACCGCCGTC ACCGCCAGCG CAGCGGCAGC CGCCGGAGCC TGGATGAATT CATGGTCGGC
GCCCACGCAC TGCTGCAGTG CGATGGCCTG ATCACCTGGA ACGATACGTT TTACCGCGAC
TACTTCAAGG GCCTGAAGCT GATCGTGCCG CAAGCCTGA
 
Protein sequence
MIAVDSPVLV ELLSNGPQAD AVEAILRQSL VGGRVVVCGA TLAEVCASLR GGAEVLEALE 
EMGVHFNPME AKSALRAGEM HRRHRQRSGS RRSLDEFMVG AHALLQCDGL ITWNDTFYRD
YFKGLKLIVP QA