| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1835 |
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| Symbol | |
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| ID | 6475788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 2066571 |
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| End bp | 2068121 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642731017 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002028222 |
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| Protein GI | 194365612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.484388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC TGGCTCATCC CAAGCGTTCG CCCCTGCGCT TGAACCGTTT TGTCTTCTTC
AGTTCCTCGG TGTCGATCGG CATCCTCGGG CTGCTCACCG TTCTCTATCC CGAAGGCAGC
GAGCACTGGC TGCAATGGGC GCAGGCCGAG GTCTCGGCGG CGTTCGGCTG GTGGTACATG
CTGCTGATCG TGCTGTGCCT GGGCTTCGTG CTGTGGCTGG CGTTCTCGCC CTACGGCCGC
ATCCGCCTGG GCCATAACGA GGAATCGCCG GCCTTCGGCT ACGTCGCCTG GGTGTCGATG
TTGTTCTCGG CAGGCATCGG CATCGCGCTG CTGTACTACG GCGCCTACGA GCCGCTGGAC
CATTTCCTCA ATCCGCCCGG GCAGCCCGGC GGAACGGTGG CAGCGGGCCG CGAGGCGATG
GTGCTGACCT TCCTGCACTG GGGCCTGCAC GGCTGGGCGC TGTACGCCCT GGTCGGCGTG
GCGCTGGGCT ATTTCGCCTA CCGCCGGAAC CTGCCGCTGG CGCTGCGCTC GGCGCTGTAC
CCGATCTTCG GTGAGCGCAT CCACGGCCGC ATCGGTGACA TGGTCGATGG CTTCGGCATC
CTTGCCACGC TGATCTCGAT GGTGACCAAC CTCGGCATTG GCGCGCTGGT GGTGCAGTCC
GGCCTGGTCT ACCTGTTCCA CATCCCGGAT ACGCCGCAGG TGCTGGTGGC GATCGTGCTG
GTGATGATGG TGGTGGCCAC CATCGGCGTG GTGGCCGGTG TGGAGAAGGG CATTGCCTGG
CTGTCCAACC TCAACGTGCG CCTGCTGTGC GGCCTGCTGC TGTTCGTGCT GGTCACCGGC
CCGACCCTGC ACCTGTTCGA CGGCCTGATC CAGAACACCG GCGATTACCT CGGCGCGTTC
GTGCGCAAGA GCTTCGACAT GTACCTCAAC GACCCGAAGG GCCGTGAGTG GATGGGCTCG
TGGACGCTCT TCTACTGGGC CTGGTGGATC GCCTGGGCGC CGTTCGTGGG TCTTTTCGTG
GCACGCATCT CGCGTGGCCG CACCATTCGT GAAGTGATCA TGGGCGTGCT GCTGATCCCG
CTCGGCTTCA CCCTGGCCTG GCTGTCGATC TTCGGCAACA CCGCCATCGA CCTGGTGCTG
AACCACGGCC AGGCGGTTCT TGGCGAGGTA GCCCAGCACG ATGCGGCGAT GACGCTGTTC
AAGCTGCTGG AATACCTGCC CGGCGCGCCG TACGTGGCCG GTGCCGCGGT GGTGATCGGC
TTCGTGCTGT TCCTGACCCC GGTCGATTCG GGCACGCTGA TGATCGCCAA CCTGTGCACC
CGTCGCGTTG ACGATGGCGT GGAAGACGGC CATGACGCGC CGATCTGGCT GCGCGTGTTC
TGGGCGGCCG GCATCACCGT GGCCAGCGTC GGCCTGCTGC TGGCCGGCAA CTTCAGTGCG
ATGCAGACGG CGGTGGTGCT GTGCGGCCTG CCGTTCTCGT TCACCCTGGC GTTCTACATG
TGGGGCCTGC TGAAGGCACT GCGCACCGAC CCGGACGCAC CGCGTCGGTA G
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| Protein sequence | MSSLAHPKRS PLRLNRFVFF SSSVSIGILG LLTVLYPEGS EHWLQWAQAE VSAAFGWWYM
LLIVLCLGFV LWLAFSPYGR IRLGHNEESP AFGYVAWVSM LFSAGIGIAL LYYGAYEPLD
HFLNPPGQPG GTVAAGREAM VLTFLHWGLH GWALYALVGV ALGYFAYRRN LPLALRSALY
PIFGERIHGR IGDMVDGFGI LATLISMVTN LGIGALVVQS GLVYLFHIPD TPQVLVAIVL
VMMVVATIGV VAGVEKGIAW LSNLNVRLLC GLLLFVLVTG PTLHLFDGLI QNTGDYLGAF
VRKSFDMYLN DPKGREWMGS WTLFYWAWWI AWAPFVGLFV ARISRGRTIR EVIMGVLLIP
LGFTLAWLSI FGNTAIDLVL NHGQAVLGEV AQHDAAMTLF KLLEYLPGAP YVAGAAVVIG
FVLFLTPVDS GTLMIANLCT RRVDDGVEDG HDAPIWLRVF WAAGITVASV GLLLAGNFSA
MQTAVVLCGL PFSFTLAFYM WGLLKALRTD PDAPRR
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