| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1829 |
|---|
| Symbol | |
|---|
| ID | 6475782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2056808 |
|---|
| End bp | 2059531 |
|---|
| Gene Length | 2724 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642731011 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002028216 |
|---|
| Protein GI | 194365606 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.552072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACC TGTTCGCACG CGTGAAGCGC CGGTTGGCGC AGCGTCCGGA TTCGGAGCAT
GGCCAGGCGA TCGTGCGGGT GGCGCTGATC TCGCTGATCC TGGTCTATGT GCTGCTGTCC
GGAGCACGCC TCCACCGTCT GGAGCAGTAC CAGGGCGTGC TGGCGACGGT GCTGACCGGA
TTGGGGCTTT CGCTGCTGCT GTTCGGTTGG CTGCTGTGGA AGCCGGAGCG CTCCGATCCG
CGCCGGGTCG CCGGGATGCT GGCCGACTAC GGCTTGATCG CCATCGGCAT GATCCAGATG
GGCGAGCCGC TGGCCTGGGT GTATGCGGTG GTGATGTGGG TGACGGTCGG CAATGGCCTG
CGGTTCGGCT CGCGCTACCT GGCTGCGGCC ATCGTGCTGG CGATGGCCAG TTTCGGTACG
ACCGTGTTGA TGACCCCTTA CTGGCAGGCC AACCTGGGCC TGGCCTTTTC CCTGTGGCTG
GGACTGCTGG CGGTGCCGTT GTGCTGCTCG TCCCTGCTGC GCCGAAGGAT GCGACATCCG
ACCATGGATA CGACCCCCGC CGCTGCCTCC CCCAACCGCT CGTTGCTGGC CCGCTTCAAG
CAGCGCCTGT CCGGGCGCGA GGACAGCGAG CACGCGCAGA ACCTGATCCG CATCGTCATC
ACCGCGCTGT TCATCAGCTA CCTGGGCTGG CGTTCGCTGA GCGGCGGTGG CGAAGCGCTG
ACCACGACCT GGTTGATCCT GGCCTTCGAG CTGACCATTT CCGCCGGCCT GCTGGCGGCG
ATCCTGGTCA ATCCCGGCGC GTCGCATGTG CGCCGGGTGA TCGGCATGCT GACCGATTAC
ACCTGCATGG CCTGGATCAT GACCATCCAG GGCGAACCGG CCGCGCCGCT GTACGCGGTG
ATGCTGTGGG TGACCATCGG CAACGGCATG CGCTACGGCA GTACCTATCT GCGCGTGGCC
ACCGCCATGG GCTGCCTGGC GTTCCTGTGT ACGGTGATGC TGTCGCCCTA CTGGCGTGGG
CACGACTATC TGGGCTGGGG CCTGCTGCTG GGCCTGGGCG CGATCCCGCT GTACTTCGAT
TCGCTGCTGC ATGCGCTCAC CCGTGCAGTG GCCGAGGCGC GCCAGGCCAA CGAAGCCAAG
AGCCGCTTCC TGGCCAACAT GAGCCATGAG TTCCGCACGC CGTTGAACGG GCTGGCCGGC
ATGACCGAAG TGCTGGCCAC CACCCGCCTG GACGATGAGC AGCGCGAGTG CCTGAACACC
ATCCAGGCTT CCACCCGCAG CCTGCTGGCG CTGGTGGAGG AGGTGCTGGA CATCTCCGCG
ATCGAGGCGG GCAAGGTGCG GGTGGAGTGG CACGAGTTCG CGCTGGCCGA TGTGCTGCAG
GCGATCAACC TGATCCTGAC CCCGCAGACC CGCTCCAAGT CGCTGGATTA CCGCGTGCAT
GTGGACGACA ACGTGCCGCC GCGCCTGCTT GGCGATGCCG GTCATCTGCA GCAGATCCTG
CTCAATCTGA TGGGCAATGC GGTCAAGTTC ACCGACAGCG GCTACGTGCA TCTGCGTGTT
TCCAGCCTGG ACGCAGCGGG CAGCGAGCGG GCGCGCCTGC GTTTCGAGAT TGTCGACAGC
GGCATCGGCG TGCCGGTGGC GCTGCGCGGT CGGCTGTTCA ATGCCTTCGA GCAGGGCGAT
GTCGGCCTGG CCCGTCGTCA TGAAGGCACT GGCCTGGGCA CGGCCATTGC CAAGGGCCTG
GTCGAATCGA TGGGCGGGCA GGTCGGTTAT GCGCCGAACA GCCCGCGCGG CAGCGTGTTC
TGGGTTGAGA TCACGCTGGA CGTGGCAGAG GCCTCATCAG CCCCGGCGGT TCCGTCCGAG
GTTGCTGAAG CCGGCAATGT CATCGCATTT TCCAACCCCT TCCTGCGCCA TCGTGCCCGG
GTGCGCAGCC TGCGCGTGCT GGTGGCCGAC GACCACGAGG CCAACCGCAT GGTGCTGCAG
CGGTTGCTGG AGAAGGCCGG CCACAAGGTC ACCTGCGTCA ATGGCGGCGC CGAAGTGCTC
GATGCATTGG AGCAGGCCAG TTACGACGCA GCGATCGTCG ATCTGCACAT GCCGGGCATG
AGCGGACTGG ACCTGCTCAA GCAGCTGCGG GTGATGCAGG CCAGCGGCAT GCCCTATGTG
CCGGTGATGG TCCTCAGTGC CGATGTCACC CCCGATTCGA TCCTGCGCTG CGAACAGGCC
GGCGCACGCG CCTTTCTGGC CAAGCCGGTA GTGGCAACCC GATTGCTGGA AGTATTGGCC
GATGTTGCTG CCAACATCCG CCCGGAATCC GGCATCCAGT CGGTTCCCGC ACTTCCGGTG
GGCGATGGCG TGCTTGATAC GGCAGTGCTG GATGAACTGG CGTCGCTGGG CATGGGCGAC
GGCTTCGAGC GCAAGTTCAT CGACCAGTGC CTGGTGGATG TCGATGCCAG CATGGGCCAG
CTGCAGGCCT GCGGCGAACG CCAGGCCTGG GAGGATTTCC GCGAGCACGC CCACGCCCTG
CGCGGGGTGG CGAGCAACCT GGGGCTGGTC CAGGTTGCTG CCTCCAGCGG CGAGATCATG
CGCATGGCGG ACTGGCAGTT GAAGGGCGAG TGGGTGGCCC GCCTTGGCAG TCTTGCCGCC
GCCCTGCGCC TCGGCAGGAA TGCACTGGTC GCCCGCAGCG CGGACATCGC GCGCCGTGAC
GACAGCGAGC GCAGCCCGTC CTGA
|
|---|
| Protein sequence | MQDLFARVKR RLAQRPDSEH GQAIVRVALI SLILVYVLLS GARLHRLEQY QGVLATVLTG
LGLSLLLFGW LLWKPERSDP RRVAGMLADY GLIAIGMIQM GEPLAWVYAV VMWVTVGNGL
RFGSRYLAAA IVLAMASFGT TVLMTPYWQA NLGLAFSLWL GLLAVPLCCS SLLRRRMRHP
TMDTTPAAAS PNRSLLARFK QRLSGREDSE HAQNLIRIVI TALFISYLGW RSLSGGGEAL
TTTWLILAFE LTISAGLLAA ILVNPGASHV RRVIGMLTDY TCMAWIMTIQ GEPAAPLYAV
MLWVTIGNGM RYGSTYLRVA TAMGCLAFLC TVMLSPYWRG HDYLGWGLLL GLGAIPLYFD
SLLHALTRAV AEARQANEAK SRFLANMSHE FRTPLNGLAG MTEVLATTRL DDEQRECLNT
IQASTRSLLA LVEEVLDISA IEAGKVRVEW HEFALADVLQ AINLILTPQT RSKSLDYRVH
VDDNVPPRLL GDAGHLQQIL LNLMGNAVKF TDSGYVHLRV SSLDAAGSER ARLRFEIVDS
GIGVPVALRG RLFNAFEQGD VGLARRHEGT GLGTAIAKGL VESMGGQVGY APNSPRGSVF
WVEITLDVAE ASSAPAVPSE VAEAGNVIAF SNPFLRHRAR VRSLRVLVAD DHEANRMVLQ
RLLEKAGHKV TCVNGGAEVL DALEQASYDA AIVDLHMPGM SGLDLLKQLR VMQASGMPYV
PVMVLSADVT PDSILRCEQA GARAFLAKPV VATRLLEVLA DVAANIRPES GIQSVPALPV
GDGVLDTAVL DELASLGMGD GFERKFIDQC LVDVDASMGQ LQACGERQAW EDFREHAHAL
RGVASNLGLV QVAASSGEIM RMADWQLKGE WVARLGSLAA ALRLGRNALV ARSADIARRD
DSERSPS
|
|---|
| |