Gene Smal_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1578 
Symbol 
ID6475447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1774893 
End bp1776911 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content65% 
IMG OID642730760 
ProductPGAP1 family protein 
Protein accessionYP_002027966 
Protein GI194365356 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA CGGGCTTGGG CTTCATCGGT CGCACGACCC TCATCATCAC CGTGCTGCTC 
ACCCTCGGTG GCTGCGCGAC GCTGCGCCAG TTCGGACCGT CGGTGCAGGT GGCCTCGGTC
ACGCCCGGCC AGTACATCGC GCTCAAGCGC GGTGACATCC TCACCACCGG CAAGCTCAGC
TCGGCAACTA CGGAAACCCT GCGCGTGGCC GGCCTCGACG AAGGCGTCTG CGCCAAGCCT
GGCCTACCCT GCATCGAAGC GATGGAAGCC ACCATCCTGG TGCGCGAGGA GGACAAGCGC
TCGAGCCTGG CCGAGTTGTG GCTGCAGTAC GCCATGACCC TGCCCGCACC GAAACGCGAG
TACTCCGCCT CGGGCCGGGC CAAGACCACC ATCACCGAAC TGGACGCCGA CTTCCAGCCG
CGCCTGGATG CCTGGATGCA GGTCGCGCGG CAGGCTTACG GGTATCTGTT CTTCACCGAG
CGCACCGCCA ACCAGCGTGG CTTCGAAGAT CGCCAGACCC AGGTGCGTGA CTATTACAAC
CTGGCCGTGC AGGAAGCCTC GGTGCAGCTG TACAACGCCT ATGCCACCGG CCGCGTGCAC
AGTGAAGCCA GCCATTTCCA GCTCGGCCGC TGGACCTTTG TGCTGGCCCC ATCAGGCGAA
GCTTCGCCAC TGGACACGCG TACCCCCACC GAGCTGGTGC CCGCCGCGTC ACTGTCGTTC
ACCGGCACGC TGCGCAGCGT GCACCGCCGC GATGGCTTCG GCGCGGAGCT GGTGGCGGTG
ATGGATGATC CAGCCAATGC CAGTGCGACG CCAACTACGA CCTCTACTTC TACCGTGGCG
ACGGCAGCGA CGCCACGCAG TTGGAGCGAG ATGCCCTCGC CGTCGATGAC AGTGCTGCTG
CGCTTCTCCG GAAAGAACCT GTGGGAAGTG CTGCACGACG ACGAGCCGGA ACTGGAGATC
CACGATCCCT ACCAGGTCAC CGAAGTCACC CTGCACGGAC AGGAAGTGCC GCTGGCGGCG
AACTTCACCG CTGGCTACGC ACTGTGGCTG GCGCGCTCGA ACTTCAGCCA CCAGTCGCTG
CGCTCGCTGT TCGGCGGCAA GGGCGGCATC GATACGCCGC ATCTGTACAT GATGCAACCG
TATGATCCGA ACCGTCGCGT GCTGCTGATG ATCCACGGTT TGGCCAGCAG CCCGGAAGCC
TGGGTCAACG TCGCCAACGA GCTGATGCGC GACGAGGAGA TCCGCCAGGA TTTCCAGATC
TGGCAGTTCT ACTACCCGAC CAACATGCCG ATCGCGATGA GCCACGATGC GATGCGTCAT
ACGCTGGCCG AGGTCTTCCA GCACTTCGAC CCCAGCGGCA AGGCGCAGGC CTCGCATGAC
ATGGTGCTGG TCGGGCACAG CATGGGCGGC GTGATTGCGC GACTGATGAT CTCCTCTTCA
GGCGACCACC TGGTCGATAC CCTGCTGGCC ACCGCACAGA TGACGCCGGC ACAGCAGGAA
CTGCTGCGCA CCAAGGGCGC GCCGGTGCTG ACCTTCCTGC CGGAACCGGA AGTATCGCGC
GTGGTGTTCA TCGCCACGCC GCACCGCGGC ACCGATGTGG CGAGCACCCG CCTGGGCCGC
TGGATCGGCC GCCTGGTGCG CTTGCCGCTG ACCGTACTGG AAGACGTGGC CACCATCGCC
AACGACGGCA AGATCGATCG CAACGACGGC AAGCACGGCT ACCAGATGAA CAGCATCCAG
AATCTGGACA AGGACGATCC CTTCGTACGC GCCGTGGCCG ACCTGCCAAT GGCGCCGAAG
GTGCACTACC ACTCGATCAT CGCCCGCGCC AAGGCCGACG GCCCGCTGGA GAAGACTGAC
GATGGGCTGG TGCCGTACTG GAGCTCGCAC CTGCCACATG CGGTTTCGGA AAAGGTGATC
GTGTCCGGGC ACAGCGTGCA GGAGGCAACC CCGGCAATCG TCGAATTGCG GCGGATCCTG
CACGAGGACA TGCAGGAGCA CGGTGCCGCG GCGAACTAG
 
Protein sequence
MATTGLGFIG RTTLIITVLL TLGGCATLRQ FGPSVQVASV TPGQYIALKR GDILTTGKLS 
SATTETLRVA GLDEGVCAKP GLPCIEAMEA TILVREEDKR SSLAELWLQY AMTLPAPKRE
YSASGRAKTT ITELDADFQP RLDAWMQVAR QAYGYLFFTE RTANQRGFED RQTQVRDYYN
LAVQEASVQL YNAYATGRVH SEASHFQLGR WTFVLAPSGE ASPLDTRTPT ELVPAASLSF
TGTLRSVHRR DGFGAELVAV MDDPANASAT PTTTSTSTVA TAATPRSWSE MPSPSMTVLL
RFSGKNLWEV LHDDEPELEI HDPYQVTEVT LHGQEVPLAA NFTAGYALWL ARSNFSHQSL
RSLFGGKGGI DTPHLYMMQP YDPNRRVLLM IHGLASSPEA WVNVANELMR DEEIRQDFQI
WQFYYPTNMP IAMSHDAMRH TLAEVFQHFD PSGKAQASHD MVLVGHSMGG VIARLMISSS
GDHLVDTLLA TAQMTPAQQE LLRTKGAPVL TFLPEPEVSR VVFIATPHRG TDVASTRLGR
WIGRLVRLPL TVLEDVATIA NDGKIDRNDG KHGYQMNSIQ NLDKDDPFVR AVADLPMAPK
VHYHSIIARA KADGPLEKTD DGLVPYWSSH LPHAVSEKVI VSGHSVQEAT PAIVELRRIL
HEDMQEHGAA AN