Gene Smal_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1518 
SymbolpanC 
ID6475387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1714513 
End bp1715352 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID642730700 
Productpantoate--beta-alanine ligase 
Protein accessionYP_002027906 
Protein GI194365296 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.317394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGA CCTTCAACGA GCTCGGCGCA CTGCGCGGGC AGATCGCCGA GTGGAAGCGC 
GAAGGCCTTC GCGTTGCGCT GGTGCCGACC ATGGGCAACC TGCACGGGGG CCACCACTCG
CTGGTGACCC TGGCCCGCCA GTACGCCGAC AAGGTGGTGG CAAGCATCTT CGTGAACCCG
ACCCAGTTCG GCCCCAACGA GGATTTCAGC CGCTACCCGC GCACGCCCGA GGCCGACGTG
GCCGGGTTGG AGCAGGCCGG CTGCGATGCG GTGTGGCTGC CCAGCGTCGA GGCGATGTAC
CCGCTGGGCG TGGACAAGAC CACGCGCATG CACGCGCCGG GTGTCAGTGA AGTGCTGGAG
GGCGCCAGCC GCCCGGGTCA CTTCGATGGC GTCTGCACGG TGGTCGCGCG CCTGTTCCTG
CAGGTGCAGC CGGACGCGGC CGTGTTTGGT CGCAAGGACT ACCAGCAGCT GGCCGTCATC
AAGCAGATGG TGGCCGAGCT GTCGTTCCCG ATCCAGATCG TCGGCGCGGA CATCGTGCGT
GACGACGATG GCCTGGCCAA GAGCTCGCGC AACCAGTACC TGAGCGCCGA ACAGCGCCCG
GTCGCGACCA GCATCCACCG CACCCTGCTG GGCATGCGCG AGGGCTACGT TGCTGGCCAG
TCGCGCGCGC AGATCGAGGC CGACGCAACG GCCGCGCTGC AGGCGGATGG TTTCCAGGTC
GACTACGCCG TGTTGCGCAC ACCGGAACTG GCCGAGCCGA CCTTCGATGG CGGCGGCCGT
GTAGCGCTGA TCGCCGCGCG CCTGGGTACG ACCCGGTTGA TCGACAACCT GGAATTCTGA
 
Protein sequence
MIQTFNELGA LRGQIAEWKR EGLRVALVPT MGNLHGGHHS LVTLARQYAD KVVASIFVNP 
TQFGPNEDFS RYPRTPEADV AGLEQAGCDA VWLPSVEAMY PLGVDKTTRM HAPGVSEVLE
GASRPGHFDG VCTVVARLFL QVQPDAAVFG RKDYQQLAVI KQMVAELSFP IQIVGADIVR
DDDGLAKSSR NQYLSAEQRP VATSIHRTLL GMREGYVAGQ SRAQIEADAT AALQADGFQV
DYAVLRTPEL AEPTFDGGGR VALIAARLGT TRLIDNLEF