Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1502 |
Symbol | |
ID | 6475367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1699034 |
End bp | 1699735 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642730680 |
Product | Pirin domain protein |
Protein accession | YP_002027890 |
Protein GI | 194365280 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.231424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA TCCGCAAGAG CGCTACCCGT GGCCTGGCCG AGCATGGCTG GCTGTCCTCG CGCCATACCT TCTCCTTTGC CAACTACTAC GACCCCCGCT ACGTCAGCTT CGGCCCGCTG CGGGTGATCA ACGAAGACAA GGTGATCGGC GGCCAGGGCT TCGGCACCCA CAGCCACAGC AACATGGAGA TCGTTTCCTA TGTGCTGGGC GGCGCGCTGG AGCACAAGGA CTCGATGGGC ACCGGTTCGG TGCTGCGTTA CGGCGACGTG CAGCGCATGA GTGCCGGCAG CGGTGTCAGC CACAGCGAGT TCAATCACTC CGCCGACGAG ACCGTGCACT TCCTGCAGAT CTGGATCTTC CCGGACGCGG AGAACATCAC GCCGTCCTAC GAAGAGACCC ACTTCGCCCC GGAAACCAAG CGCGGCCAGC TGCGCCTGAT CGCCTCGCCG GACGGTGCCG ACGGTTCGCT GCGCATCCAC CAGGATGCCC GCATCTTCGC CACCATCCTC GATGGCGGCC AGAAGCTGCA CCACGCCCTC GGCAACGGTC GTGGCGCCTA TGTGCAGGTA GCCCGAGGCC AGCTGCAGGT CAATGGCATC ACCCTCGAAG CCGGTGATGC ACTGCAGGTC AGCGACGAAG CACAGCTGAC CCTGGAAAAC GGCAACGACG CCGAAGTGCT GGTGTTCGAC CTGCCGCTGT AA
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Protein sequence | MLQIRKSATR GLAEHGWLSS RHTFSFANYY DPRYVSFGPL RVINEDKVIG GQGFGTHSHS NMEIVSYVLG GALEHKDSMG TGSVLRYGDV QRMSAGSGVS HSEFNHSADE TVHFLQIWIF PDAENITPSY EETHFAPETK RGQLRLIASP DGADGSLRIH QDARIFATIL DGGQKLHHAL GNGRGAYVQV ARGQLQVNGI TLEAGDALQV SDEAQLTLEN GNDAEVLVFD LPL
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