Gene Smal_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1502 
Symbol 
ID6475367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1699034 
End bp1699735 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID642730680 
ProductPirin domain protein 
Protein accessionYP_002027890 
Protein GI194365280 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.231424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA TCCGCAAGAG CGCTACCCGT GGCCTGGCCG AGCATGGCTG GCTGTCCTCG 
CGCCATACCT TCTCCTTTGC CAACTACTAC GACCCCCGCT ACGTCAGCTT CGGCCCGCTG
CGGGTGATCA ACGAAGACAA GGTGATCGGC GGCCAGGGCT TCGGCACCCA CAGCCACAGC
AACATGGAGA TCGTTTCCTA TGTGCTGGGC GGCGCGCTGG AGCACAAGGA CTCGATGGGC
ACCGGTTCGG TGCTGCGTTA CGGCGACGTG CAGCGCATGA GTGCCGGCAG CGGTGTCAGC
CACAGCGAGT TCAATCACTC CGCCGACGAG ACCGTGCACT TCCTGCAGAT CTGGATCTTC
CCGGACGCGG AGAACATCAC GCCGTCCTAC GAAGAGACCC ACTTCGCCCC GGAAACCAAG
CGCGGCCAGC TGCGCCTGAT CGCCTCGCCG GACGGTGCCG ACGGTTCGCT GCGCATCCAC
CAGGATGCCC GCATCTTCGC CACCATCCTC GATGGCGGCC AGAAGCTGCA CCACGCCCTC
GGCAACGGTC GTGGCGCCTA TGTGCAGGTA GCCCGAGGCC AGCTGCAGGT CAATGGCATC
ACCCTCGAAG CCGGTGATGC ACTGCAGGTC AGCGACGAAG CACAGCTGAC CCTGGAAAAC
GGCAACGACG CCGAAGTGCT GGTGTTCGAC CTGCCGCTGT AA
 
Protein sequence
MLQIRKSATR GLAEHGWLSS RHTFSFANYY DPRYVSFGPL RVINEDKVIG GQGFGTHSHS 
NMEIVSYVLG GALEHKDSMG TGSVLRYGDV QRMSAGSGVS HSEFNHSADE TVHFLQIWIF
PDAENITPSY EETHFAPETK RGQLRLIASP DGADGSLRIH QDARIFATIL DGGQKLHHAL
GNGRGAYVQV ARGQLQVNGI TLEAGDALQV SDEAQLTLEN GNDAEVLVFD LPL