Gene Smal_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1329 
Symbol 
ID6475184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1516386 
End bp1517738 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content68% 
IMG OID642730497 
Productbeta alanine--pyruvate transaminase 
Protein accessionYP_002027717 
Protein GI194365107 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.759246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.141438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTC CCGAAAGCGA CCTGCACGAC CTGGCCACCC AGCGCCCCGA GTCACTGGAC 
GCGTATTGGA TGCCGTTCAC CGCCAACCGC CAGTACAAGG CCGCACCGCG CATGCTGGTA
CGGGCCGAAG GCATGCACTA CGAGGACGTC GACGGCCGCC AGATCCTCGA TGGCACCGCC
GGCCTGTGGT GCTGCAATGC CGGCCACGCG CGGCCGCACA TCGTCAACGC CATCGTCGAG
CAGGCGCGTA CCCTGGATTA CTCGCCCGCG TTCCAGATGG GGTCGCCACC GGCGTTCGCG
CTGGCACAGC GGCTGGCGGC ATTGGCGCCG CCTCCGCTCA ACCATGTGTT CTTCACCAGT
TCCGGCTCCG AGGCAGTGGA TACCGCGATG AAGATCGTGC TGGCTTACCA CCGCCAGCGC
GGCGAGGGCC AGCGCACCCG CTTCATCAGC CGCGAAAAGG CCTATCACGG GGTCGGTTTC
GGCGGCATGG CGCTGGGCGG GCTGCCCAAC AACCGCAAGC CATTCAGCCT GCAGCTGGGT
GGAGTGGATT ACCTGCGGCA CACCCTGGAC CTGCCGCGCA ATGCGTTCAG CAAGGGCCTG
CCACGTCAGG GCGCGGAGCT GGCCGACGAC CTGGAACGGC TGATCGCGCT GCATGACGCC
TCGACAATCG CCGCCGTATT CGTCGAGCCC ATTGCCGGTT CCGCCGGGGT GATCCTGCCC
GCGCCGGGCT ACCTGCAGCG GCTGCGCGAG CTGTGCGACC ACCACGGCAT CCTGCTGGTG
TTCGACGAGG TCATCACCGG TTTCGGCCGG GTTGGCATGC CGTTCGCCGC ACAGCGCTTC
GGGGTCACCC CGGACCTGCT GACCTTCGCC AAGGCGGTCA GCAATGGCGC GGTGCCGCTG
GGCGGCGTGC TGGCCAGCGA TGCCGTGCAT GCGGCCCTGA TGCAGGCGCC GCCGCAGGCC
ATCGAGCTGT TCCATGGCTA CACCCACTCC GGCCATCCAC TGGCCTGCGC GGCGGCGCTG
GCCACGCTGG ACGTCTACGC GGAAGAACGC TTGTTCGAGC GTGCCATCGA GCTGGGCGAG
TACTGGCAGG AGCGGTTGCA TGCCCTGCAG GGCCTGCCCA ACGTGATCGA TATCCGCAAC
TTCGGGCTGG TCGGTGCGGT CGAACTGGCG CCGCGCCGGG ATGCGCCGGG CAGCCGCGGC
TACGAGGTGT TCCGGCGCTG CTTCCACGAC GGCCGGCTGC TGGTGCGCTG TACCGGCGAC
ATCATCGCAC TGTCGCCGCC GCTGATCGTG GACAAGGCGC AGATCGACCA GATCACCGGC
ATCCTGGGCG AGATGATCCG GGCCACCGCC TGA
 
Protein sequence
MKRPESDLHD LATQRPESLD AYWMPFTANR QYKAAPRMLV RAEGMHYEDV DGRQILDGTA 
GLWCCNAGHA RPHIVNAIVE QARTLDYSPA FQMGSPPAFA LAQRLAALAP PPLNHVFFTS
SGSEAVDTAM KIVLAYHRQR GEGQRTRFIS REKAYHGVGF GGMALGGLPN NRKPFSLQLG
GVDYLRHTLD LPRNAFSKGL PRQGAELADD LERLIALHDA STIAAVFVEP IAGSAGVILP
APGYLQRLRE LCDHHGILLV FDEVITGFGR VGMPFAAQRF GVTPDLLTFA KAVSNGAVPL
GGVLASDAVH AALMQAPPQA IELFHGYTHS GHPLACAAAL ATLDVYAEER LFERAIELGE
YWQERLHALQ GLPNVIDIRN FGLVGAVELA PRRDAPGSRG YEVFRRCFHD GRLLVRCTGD
IIALSPPLIV DKAQIDQITG ILGEMIRATA