Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1102 |
Symbol | |
ID | 6474953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1257764 |
End bp | 1258573 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642730266 |
Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
Protein accession | YP_002027490 |
Protein GI | 194364880 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACGAC GCCCGCCCCT GCTGATCAAT ACCGAGGCCA TCGAACTGTG GCCTGCGGAC CTGCTGCGTG CGCGCAGCAA CCTGGACGCG CGCCTGCTGT CACAGGCGCG ATGGGTGCTG CGGCGCAAGC GTGATGGCCG CTATCTGGCG GCGGCACTGC CGCACGGCGT GCATTCGATG GTGCCGCGCC TGCCGCGCGA GCCCGGGGTC GAGGATGCAC TGGCGCTGCT GGATGCAACC CGCTCCCGCC CTTTCGCGGT CACGCTGGAA GATCAGTGGC TGCCATTGGC CGGGCTGCAG CATCGCCTGC AGCAGCTGGG TCTGGATGCA CAGCGCTATG CAGACGACAG CGGCCTGCCA CTGGAACCTG AGCCCTGCCT GTTGCATTTC GCCGGCCGTG ATCGCTTCGC CCGCCCGCTG TGGCTGCGCC GCGGTGCCGC GCAGGGGTGG CGGCGGATGC AACTGCACGC CGCGCGGGAC GGCATTGCGC TGGACGCGAT CTCCGGCTTC CGCAGCCACG CTTACCAGCT GGGCATCTTC GAACGGAAGC TGGCGCGCGG TTTGAGCGTG GCGGAGATCC TGAAGGTCAA CGCCGCGCCG GGTTTCAGCG AACACCACAG CGGCCACGCG CTGGACATCG GCGCCCCCGG CGATGCCCCC GCCGAAGAGA CCTTCGAAGC CACCGACGCA TTCGCATGGC TGCAGGCGCA TGCCGGCGGG CATGGCTTCC ATCTGAGCTA CCCCCGCGAC AACCCGCACG GGATCGTTTA CGAACCGTGG CACTGGTGCT GGAGACCGGC CAACGGCTGA
|
Protein sequence | MQRRPPLLIN TEAIELWPAD LLRARSNLDA RLLSQARWVL RRKRDGRYLA AALPHGVHSM VPRLPREPGV EDALALLDAT RSRPFAVTLE DQWLPLAGLQ HRLQQLGLDA QRYADDSGLP LEPEPCLLHF AGRDRFARPL WLRRGAAQGW RRMQLHAARD GIALDAISGF RSHAYQLGIF ERKLARGLSV AEILKVNAAP GFSEHHSGHA LDIGAPGDAP AEETFEATDA FAWLQAHAGG HGFHLSYPRD NPHGIVYEPW HWCWRPANG
|
| |