Gene Smal_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1102 
Symbol 
ID6474953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1257764 
End bp1258573 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID642730266 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_002027490 
Protein GI194364880 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC GCCCGCCCCT GCTGATCAAT ACCGAGGCCA TCGAACTGTG GCCTGCGGAC 
CTGCTGCGTG CGCGCAGCAA CCTGGACGCG CGCCTGCTGT CACAGGCGCG ATGGGTGCTG
CGGCGCAAGC GTGATGGCCG CTATCTGGCG GCGGCACTGC CGCACGGCGT GCATTCGATG
GTGCCGCGCC TGCCGCGCGA GCCCGGGGTC GAGGATGCAC TGGCGCTGCT GGATGCAACC
CGCTCCCGCC CTTTCGCGGT CACGCTGGAA GATCAGTGGC TGCCATTGGC CGGGCTGCAG
CATCGCCTGC AGCAGCTGGG TCTGGATGCA CAGCGCTATG CAGACGACAG CGGCCTGCCA
CTGGAACCTG AGCCCTGCCT GTTGCATTTC GCCGGCCGTG ATCGCTTCGC CCGCCCGCTG
TGGCTGCGCC GCGGTGCCGC GCAGGGGTGG CGGCGGATGC AACTGCACGC CGCGCGGGAC
GGCATTGCGC TGGACGCGAT CTCCGGCTTC CGCAGCCACG CTTACCAGCT GGGCATCTTC
GAACGGAAGC TGGCGCGCGG TTTGAGCGTG GCGGAGATCC TGAAGGTCAA CGCCGCGCCG
GGTTTCAGCG AACACCACAG CGGCCACGCG CTGGACATCG GCGCCCCCGG CGATGCCCCC
GCCGAAGAGA CCTTCGAAGC CACCGACGCA TTCGCATGGC TGCAGGCGCA TGCCGGCGGG
CATGGCTTCC ATCTGAGCTA CCCCCGCGAC AACCCGCACG GGATCGTTTA CGAACCGTGG
CACTGGTGCT GGAGACCGGC CAACGGCTGA
 
Protein sequence
MQRRPPLLIN TEAIELWPAD LLRARSNLDA RLLSQARWVL RRKRDGRYLA AALPHGVHSM 
VPRLPREPGV EDALALLDAT RSRPFAVTLE DQWLPLAGLQ HRLQQLGLDA QRYADDSGLP
LEPEPCLLHF AGRDRFARPL WLRRGAAQGW RRMQLHAARD GIALDAISGF RSHAYQLGIF
ERKLARGLSV AEILKVNAAP GFSEHHSGHA LDIGAPGDAP AEETFEATDA FAWLQAHAGG
HGFHLSYPRD NPHGIVYEPW HWCWRPANG