Gene Smal_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1001 
Symbol 
ID6478356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1140471 
End bp1141946 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content64% 
IMG OID642730165 
Productcysteine desulfurase activator complex subunit SufB 
Protein accessionYP_002027389 
Protein GI194364779 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.260746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG AAACCATCGA AAACGTCGCC AGCGACGACA CCCCCAACCG CGAGATCCAC 
GAGCAGCTCG GCCGCAAGTA TTCGGCCGGC TTCATCACGG ACATCGAATC GGACTCCCTT
CCCGCCGGCC TCGACGAGGA CACCATCCGT GCCCTGTCGG CCAAGAAGGA AGAGCCGGAA
TGGATGACGC AGTGGCGCCT GGACGCCTAC CGCCACTTCC TGACCATGCC GATGCCGAAC
TGGGCCAAGC TGCAGATCTC CCCGATCGAT CTGCAGGCGC TCAGCTACTA CTCCGCGCCG
AAGGGCCCGA AGTACGCCTC GCTGGACGAC GTGCCGAAGG AACTGCTGGA TACCTACGAC
AAGCTGGGCG TGCCGCTGCA CGAGCGCGCC AAGCTGGCCG GCGTGGCGGT CGACGCGGTG
TTCGACTCGG TGTCCGTCGG TACCACCTTC CGCAAGGAAC TGGCCGAGAA GGGCATCGTG
TTCTGCTCGA TGTCCGAGGC GATCAAGGAG CATCCGGAGC TGGTCAAGCA GTACCTCGGC
ACCGTGGTGC CGGTCGGCGA CAACTATTTC GCCGCGCTCA ATTCGGCGGT GTTCTCCGAT
GGCAGCTTCG TGTTCATCCC CAAGGGCGTG CGTTGCCCGA TGGAGCTGAG CACCTATTTC
CGCATCAACG CCGGCCACAC CGGCCAGTTC GAGCGCACGC TGATCATCTG CGAGGACAAG
GCCTACGTGT CCTACCTGGA AGGCTGCACC GCGCCGATGC GCGATGAGAA CCAGCTGCAC
GCCGCCGTGG TCGAGCTGGT CGCGCTGGAA GATGCGGAAA TCAAGTACTC CACGGTGCAG
AACTGGTACC CGGGCGACGA GAACGGCGTC GGCGGCATCT ACAACTTCGT CACCAAGCGT
GCCGAATGCC GTGGCGCGCG CAGCAAGGTC ACCTGGACCC AGGTCGAGAC CGGTTCGGCG
ATCACCTGGA AGTACCCGTC CTGCGTGCTG CTGGGCGATG ACTCGGTCGG TGAGTTCCAC
TCGGTGGCAC TGACCCATCA CCGCCAGCAG GCCGACACCG GCACCAAGAT GATCCACGTC
GGCAAGCGCA CCAAGAGCAA GATCATCAGC AAGGGCATCA GCGCTGGCCG TGGCCAGAAC
ACCTACCGCG GCCTGGTCCG GGTCGACCGC AACGCCGATG GCGCGCGCAA CTACACCCAG
TGTGATTCGC TGCTGATCGG CAAGCAGTGC GGTGCGCACA CCTTCCCCTA CATCGAGGTG
AAGAACCCGG GCGCCACGGT CGAGCACGAG GCCACCACTT CGAAGATCTC CGACGACCAG
CTGTTCTACT GCCGCGCTCG TGGCATCAGC CAGGAAGACG CGGTGTCGAT GATCGTCGAC
GGCTTCTGCA AGCAGGTGTT CCGCGAACTG CCGATGGAGT TCGCGGTGGA AGCCAAGAAG
CTGCTGGAAG TCTCGCTGGA AGGCAGCGTC GGATGA
 
Protein sequence
MATETIENVA SDDTPNREIH EQLGRKYSAG FITDIESDSL PAGLDEDTIR ALSAKKEEPE 
WMTQWRLDAY RHFLTMPMPN WAKLQISPID LQALSYYSAP KGPKYASLDD VPKELLDTYD
KLGVPLHERA KLAGVAVDAV FDSVSVGTTF RKELAEKGIV FCSMSEAIKE HPELVKQYLG
TVVPVGDNYF AALNSAVFSD GSFVFIPKGV RCPMELSTYF RINAGHTGQF ERTLIICEDK
AYVSYLEGCT APMRDENQLH AAVVELVALE DAEIKYSTVQ NWYPGDENGV GGIYNFVTKR
AECRGARSKV TWTQVETGSA ITWKYPSCVL LGDDSVGEFH SVALTHHRQQ ADTGTKMIHV
GKRTKSKIIS KGISAGRGQN TYRGLVRVDR NADGARNYTQ CDSLLIGKQC GAHTFPYIEV
KNPGATVEHE ATTSKISDDQ LFYCRARGIS QEDAVSMIVD GFCKQVFREL PMEFAVEAKK
LLEVSLEGSV G