Gene Smal_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0909 
Symbol 
ID6478182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1052119 
End bp1053252 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID642730073 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002027297 
Protein GI194364687 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG CCAACCGCGC GCGTGCCGAA CAGCACGCGA CCCGCGCTGC ATTCTTCATT 
CCCGGTTTCG CCACGGCGTT GTGGGCAACA CTGGTGCCGT TCGCCAAGGC GCGCACCGAC
ATCAACGACG CTACGCTGGG CCTGGTGCTG CTCTGCCTCG GTGCCGGTTC GCTGCTGGCC
ATGCCGCTGT CCGGTGTACT GGCCGCACGC CTGGGCTGCC GGCGGGTGAT GGTGGCCAGC
AGCCTGCTGA TCTGCCTGAC CGTACCCGGC CTGGCGCTGG CCGGTTCGGC CTGGACGCTG
GGGCTGGTGC TGTTCGTGTT CGGCGCCGCC GTGGGCGCGA TGGACTGCAC GATGAACGTG
CAGGCCGTCA TCGTTGAGCG CGAATCACGA CGCGTGATGA TGTCCGGCTT CCATGCCTTC
TTCAGCATCG GTGGTTTCCT CGGCGCGGCA ACCATGACCG TGCTGCTGTC CGCACAGCTG
CCGCCACTGG CATCGGTGCT GATCGGCGTG GGCGCCATGC TGCTGGTGAT GCTGTTGTCG
GCGGCCTACT GGCACAGCGA GCGCATGCCG CACGACACAC CGATGCTGGC CATTCCGCAC
GGCATCGTGC TGTTCATCGG CGTGCTGGCG TTCGTCGCTT TCCTCGGCGA AGGCGCGATG
CTGGACTGGA GCGCGGTCTT CCTCAGCGAT GTGCGTCGCG TCGATGCCAG CATTGCCGGT
ATCGGCTATG TGACCTTCAC CCTGACCATG ACCGTCGCAC GCCTGTTCGG CGATGCGCTG
GTAGCGTGTG TGGGCCGTGA GCGCGCGATC GTATTTGGCG CCCTGCTCGC CGCCGCGGGC
GTGCTGGTGT TGACCCTGGT CACGCCGTGG CAGGCGTCGC TGATCGGCTA TGTGCTGGTC
GGCCTCGGCT GCGCCAACAT CGCACCGGCG CTGTTCTCAC TGGCCGGCCA CCAGACCCGC
ATGCCCGGCG CGCTGGCGAT CACTGCAGTA TCCACGCTGG GCTTTGCCGG CATCCTCGCC
GGGCCTGCCT TGATCGGCTT CGCCGCCAAT CATTTCGGCC TGATCGCTGC GTTCATCGGC
GTGGCCGTGG CCTTGTTGCT GGTGGCTGTG TCCACACGTT GGCTACGGGT CTAA
 
Protein sequence
MSLANRARAE QHATRAAFFI PGFATALWAT LVPFAKARTD INDATLGLVL LCLGAGSLLA 
MPLSGVLAAR LGCRRVMVAS SLLICLTVPG LALAGSAWTL GLVLFVFGAA VGAMDCTMNV
QAVIVERESR RVMMSGFHAF FSIGGFLGAA TMTVLLSAQL PPLASVLIGV GAMLLVMLLS
AAYWHSERMP HDTPMLAIPH GIVLFIGVLA FVAFLGEGAM LDWSAVFLSD VRRVDASIAG
IGYVTFTLTM TVARLFGDAL VACVGRERAI VFGALLAAAG VLVLTLVTPW QASLIGYVLV
GLGCANIAPA LFSLAGHQTR MPGALAITAV STLGFAGILA GPALIGFAAN HFGLIAAFIG
VAVALLLVAV STRWLRV