Gene Smal_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0893 
Symbol 
ID6478166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1039131 
End bp1039721 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID642730057 
Productphage baseplate assembly protein V 
Protein accessionYP_002027281 
Protein GI194364671 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.176645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AACACGCGCG GTTGATCGGC AACCTGCTGA TGATCGGTGT GGTACGCGAG 
CTGGACGAGG CGAACGGGCG TGTTCGCGTC GATGCCGACG GCATGCTCAC CGACTGGATT
CCCTGGCTGG AACGCCGCGC GGGCCCGGGC GTACGCAGCT GGTGCGCCCC CGAACCCGGC
GAGCAGGTCG TACTGGCCTG CCCCTATGGC GATCCCGGCC AGGCGCTGGT ACTCGGCAGC
CTGTACCAGG ACCGCTTTCC GCCGCCGGCC GACTCGCGCC TGCGGCAACG CACCGAGTTC
GCCGACGGCA GCACCGTCGA GTACGACCAG GAAACCACCA CGCTCAACGT CCATGTCGGC
AGCGGCAAGG TCATCGTCAC CTGCGCGAAT GCACAGGTGA TCGCCAGCGA ATCGATCGTG
CTCGATACGC CCTCGATCAA GGCGACCGGC GATCTGGATG TCAGCGGCGC GATCAGCGCT
GGCAAGGACA TCAGCACACC GGGCGAGATC AAGGCTGGCG CCATCGGCCT GAAGGCACAC
AAGCACACCG CACAGGGCCC AACCGCCCCG ACCACGCCGG CCCAGGCTTG A
 
Protein sequence
MSAEHARLIG NLLMIGVVRE LDEANGRVRV DADGMLTDWI PWLERRAGPG VRSWCAPEPG 
EQVVLACPYG DPGQALVLGS LYQDRFPPPA DSRLRQRTEF ADGSTVEYDQ ETTTLNVHVG
SGKVIVTCAN AQVIASESIV LDTPSIKATG DLDVSGAISA GKDISTPGEI KAGAIGLKAH
KHTAQGPTAP TTPAQA