Gene Smal_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0879 
Symbol 
ID6478151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1026135 
End bp1026488 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content67% 
IMG OID642730042 
Producttype IV pilus assembly PilZ 
Protein accessionYP_002027267 
Protein GI194364657 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3215] Tfp pilus assembly protein PilZ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.766013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA GCAACGCCCG CCAGGGCATC CTGTCCCTGG CTGTGAAGGA CAAAGCCGCG 
CTGTACAGCG CGTACATGCC GTTCGTGAAG AATGGCGGCA TCTTCGTGCC CACGCCCAAG
CGCTACTTCC TGGGCGACGA GGTGTTCCTG CTGCTGACCC TGCCTGATTC CAGCGAGCGC
CTGCCGGTGG CCGGCAAGGT GATCTGGGTG ACCCCGGCCG GCGCGCAGGG CAACCGCACC
GCTGGCATCG GCGTGCAGCT GGCCGACGGT GCCGAAGGCG AGGGCGTGCG CCACAAGATC
GAGACGCTGC TGGCCGGCCT GACCAGCTCG GACAAGCCGA CGCATACGAT GTGA
 
Protein sequence
MSASNARQGI LSLAVKDKAA LYSAYMPFVK NGGIFVPTPK RYFLGDEVFL LLTLPDSSER 
LPVAGKVIWV TPAGAQGNRT AGIGVQLADG AEGEGVRHKI ETLLAGLTSS DKPTHTM