| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0862 |
|---|
| Symbol | |
|---|
| ID | 6478134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1008806 |
|---|
| End bp | 1010755 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642730025 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_002027250 |
|---|
| Protein GI | 194364640 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATC CCCTCGATCA ACTGGACCGC AGCACGCGTG CCTGGACGTT GGCCTGTGCG
GCGCTGGCCC TGCTGCCACT GCTGCTGCAG TTGCCACCGC TGCTGGCGGT AGTGATCGCG
ATCGCTGCGA TGTTGACCGC TGCGCTGTCC TGGCGACGCG TGCTGCCGAT GCCGGTGCGC
CTGCTGCTGG TGCTGGGCAT GCTCGCCGCC ATTGTCTGGC AGATGGGCAT GGTGCGCCCC
GGTCGCGATA CCGGCTGCGC TCTGCTGGCG GCGATGCTGG CGATCAAATC CAGCGAACTG
CGCAGCCTGC GCGACGCGCG CAGCCTGCTC GGCTTTGCGC TGTTTGCTCC GTTCGCCGCA
TTCCTGCTCG ACCAGGGACC ACTGACCACA ACCCTGGCCG CGCTCGCCGG TGTCGGCACG
CTGCTTGCGC TGCAACGCCT GGCACATGAT GAGGGCCGTG CCGGCCGCCT GCCGTTGCGC
GGACAGCTGC GCAGTGTCGG CCGCCTGCTG GCGATCGGCC TGCCGCTGGC TCTGGCCAGC
TTCTGGCTGT TCCCGCGCCT GGCCACGCCG CTGTGGGGTG TTCCCGAACG CGCGGTGGGC
ACGCCGGGGC TGTCCGACAG CATGGAGCCC GACCAGTGGC TGGACCTGAT GGCCGACGAC
ACCCCGGCGC TGCGCGTGCA GTTCTTCGGC GCGGTGCCGG AACCGGCGCA GCGCTACTGG
CGAGGCCCGG TGCTGACCGC CTTCGATGGC CGCCGCTGGT CGCGCGATCG CGCCAGCGCG
CGAAGGCCGG CCGCCACGGT CGAAGCCAGC GCGCAGGGCT GGGATTACCA GATCGACTAC
GAGCCGACCG ATCGCCGCCA GCTGGTGGCG CTGGACCTGC CCAGCCGCGC CCCCGAGGGC
AGCACGCTGG ACGCGGACAT GAGCCTGAGC AGCGAGCGTC CGCTGGCGTC GCTGAGCCGA
TGGCGCCTGC ACTCGGCCCC GCCCGCACGG TTCGACAGCA CCCTGTCACC CTACCTGCGT
CGTGCGGCAC TGCAGCTGCC CGGCGGCTTC AACCCGCGCA CCGCCACCCT GGCCCAGCAA
TGGCGGCAGG AGGCCGGCGC CGACGACGAG GCCATCGTCC GCCGCGCGCT GCAATGGATC
ACCCGCGACT TCTCCTACAC GCTGGCCACG CCCCCGGCAG GGCGTGATCC GGTCGACGAG
TTCCTGTTCG GCTACAAAGC CGGCTTCTGC CAGCACTTCA GCTCGGCCTT CGTGGTGCTG
ATGCGCAATG CCGGCATTCC GGCACGCGTG GTGACCGGCT TCGCGGGAGG TACCCGCAAC
CGCATCGGCG ACTACTGGGT GCTGCGGCGG ATGGACGCCC ATGCCTGGGC CGAGGTATGG
CTGCCGCAAC GCGGCTGGGT GCGGGTCGAC CCGACCGCTG CCGTCGCCCC CGAACGTATT
CTCGACACCC TCGACGATCG CCTGCAGGCC GGCACCGACA CGCCGATGCA ACAGCGCTGG
CTGCAACTGG GGCAGATGGG CGACTGGCTG CGCCGCGGCT GGAATGACCT GGTGCTGTCC
TTCGATGCGC GCCGCCAGCA GCAGCTGCTC AAGCCGCTTG GGCTGGACGA CCTGGGGCCG
GCACAGCTGA TAGCCGGCTT CGTGACGGCC GCGTTGATGG CGCTGGCGTG GATGGCCTGG
CTGCTGGCCC GCGGCGAACG CGAACGTGAT CCGCTGCTGC GCGGCTGGCA CCGGCTGGGT
CGCCGCTACG CCCCCCTCGG CCTGGCCCGC GAACCGCATG AAACCGCACA GGACTGGGCG
CGTCGGGTAC ATGCCCGCCG CCCCGATCCG GCACTGCTGG CACTCAGCCA GCGTTTCGCC
GACGCGCGTT ACGCTGGAAC TTGCACCGAG CTCGCTTCAT TATTGCGGGA CCTGCGCAGG
CATCGCCCGA CTTCCGGAGC CTCCCCATGA
|
|---|
| Protein sequence | MADPLDQLDR STRAWTLACA ALALLPLLLQ LPPLLAVVIA IAAMLTAALS WRRVLPMPVR
LLLVLGMLAA IVWQMGMVRP GRDTGCALLA AMLAIKSSEL RSLRDARSLL GFALFAPFAA
FLLDQGPLTT TLAALAGVGT LLALQRLAHD EGRAGRLPLR GQLRSVGRLL AIGLPLALAS
FWLFPRLATP LWGVPERAVG TPGLSDSMEP DQWLDLMADD TPALRVQFFG AVPEPAQRYW
RGPVLTAFDG RRWSRDRASA RRPAATVEAS AQGWDYQIDY EPTDRRQLVA LDLPSRAPEG
STLDADMSLS SERPLASLSR WRLHSAPPAR FDSTLSPYLR RAALQLPGGF NPRTATLAQQ
WRQEAGADDE AIVRRALQWI TRDFSYTLAT PPAGRDPVDE FLFGYKAGFC QHFSSAFVVL
MRNAGIPARV VTGFAGGTRN RIGDYWVLRR MDAHAWAEVW LPQRGWVRVD PTAAVAPERI
LDTLDDRLQA GTDTPMQQRW LQLGQMGDWL RRGWNDLVLS FDARRQQQLL KPLGLDDLGP
AQLIAGFVTA ALMALAWMAW LLARGERERD PLLRGWHRLG RRYAPLGLAR EPHETAQDWA
RRVHARRPDP ALLALSQRFA DARYAGTCTE LASLLRDLRR HRPTSGASP
|
|---|
| |