Gene Smal_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0558 
Symbol 
ID6477462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp663145 
End bp663984 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID642729703 
Productglycosyl transferase family 2 
Protein accessionYP_002026946 
Protein GI194364336 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.863042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0344397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGTTG CCATTGCCGC CATCGTCGTC ACGTACCAGA GCGGCAGCAC CATCGACGCC 
TGCCTCTCGC GTCTGCGCCA GGCGCAGGAC GTGGCCGAGA TCCGGGTGAT CGACAATGGC
TCGATGGATG GCACGCTGGA TATCGTGCAG CGCCATGCCA GCCACGACCC GCGCGTGCGT
TTCGTCGGCA ATCCGGACAA TCCCGGCTTT GCCGCCGCCA ACAACCAGGG CGTGGCCGAT
TCGAGCAGCC CGTGGCTGGC CTTCATCAAT CCGGACCTGA TGGTCGAGCC GGATACGCTG
GCCGGATTGC GCAGCCGCGC CGACGCCCTC GGTGACTGCC TGCTGGGTGT CGAACAGCTG
GATGAGCATG GTCAGGCCGA TGAGGCCGTG CGCCGCCGTG ACCCGGATTT CCTGTTGATG
CTGCGCTCGC CGGGCAAGGG CTCGAAACTG GCCGTTCCGC GTGACCCGCA GCAGGCACTG
CAGCGGGTGC CGGCGTTGTC CGGTGCCTTG CTGATGATGT CGCGCGCGCT GTTCGACCGT
ATCGGTGGCT GGGACGCCGG TTACCGCCTG CATGCCGAAG ACCTGGACCT GTGCCGGCGT
GCACGCGAAG CCGGAGCAGT GGTGGCGATC GCCAATGACC TGCAGGTCAC CCACGTTCGT
GGCGTCTCCA GCCGCTCGCG GCCGTTCTTC GTGGAATGGC ACAAGCACAA GGGCCTGTGG
CGCTATTTCC AGAAGTTCGA GGCCAGGCAG CGTTCGCTGC CGGTGCGGGT AGCGGTGTGG
GGCGCGATCT GGGCGCACGC GCTGATGCTG GTGCCGAAGC TGCTGCGCAA GGCGCTGTAG
 
Protein sequence
MNVAIAAIVV TYQSGSTIDA CLSRLRQAQD VAEIRVIDNG SMDGTLDIVQ RHASHDPRVR 
FVGNPDNPGF AAANNQGVAD SSSPWLAFIN PDLMVEPDTL AGLRSRADAL GDCLLGVEQL
DEHGQADEAV RRRDPDFLLM LRSPGKGSKL AVPRDPQQAL QRVPALSGAL LMMSRALFDR
IGGWDAGYRL HAEDLDLCRR AREAGAVVAI ANDLQVTHVR GVSSRSRPFF VEWHKHKGLW
RYFQKFEARQ RSLPVRVAVW GAIWAHALML VPKLLRKAL