Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0558 |
Symbol | |
ID | 6477462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 663145 |
End bp | 663984 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729703 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002026946 |
Protein GI | 194364336 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.863042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0344397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATGTTG CCATTGCCGC CATCGTCGTC ACGTACCAGA GCGGCAGCAC CATCGACGCC TGCCTCTCGC GTCTGCGCCA GGCGCAGGAC GTGGCCGAGA TCCGGGTGAT CGACAATGGC TCGATGGATG GCACGCTGGA TATCGTGCAG CGCCATGCCA GCCACGACCC GCGCGTGCGT TTCGTCGGCA ATCCGGACAA TCCCGGCTTT GCCGCCGCCA ACAACCAGGG CGTGGCCGAT TCGAGCAGCC CGTGGCTGGC CTTCATCAAT CCGGACCTGA TGGTCGAGCC GGATACGCTG GCCGGATTGC GCAGCCGCGC CGACGCCCTC GGTGACTGCC TGCTGGGTGT CGAACAGCTG GATGAGCATG GTCAGGCCGA TGAGGCCGTG CGCCGCCGTG ACCCGGATTT CCTGTTGATG CTGCGCTCGC CGGGCAAGGG CTCGAAACTG GCCGTTCCGC GTGACCCGCA GCAGGCACTG CAGCGGGTGC CGGCGTTGTC CGGTGCCTTG CTGATGATGT CGCGCGCGCT GTTCGACCGT ATCGGTGGCT GGGACGCCGG TTACCGCCTG CATGCCGAAG ACCTGGACCT GTGCCGGCGT GCACGCGAAG CCGGAGCAGT GGTGGCGATC GCCAATGACC TGCAGGTCAC CCACGTTCGT GGCGTCTCCA GCCGCTCGCG GCCGTTCTTC GTGGAATGGC ACAAGCACAA GGGCCTGTGG CGCTATTTCC AGAAGTTCGA GGCCAGGCAG CGTTCGCTGC CGGTGCGGGT AGCGGTGTGG GGCGCGATCT GGGCGCACGC GCTGATGCTG GTGCCGAAGC TGCTGCGCAA GGCGCTGTAG
|
Protein sequence | MNVAIAAIVV TYQSGSTIDA CLSRLRQAQD VAEIRVIDNG SMDGTLDIVQ RHASHDPRVR FVGNPDNPGF AAANNQGVAD SSSPWLAFIN PDLMVEPDTL AGLRSRADAL GDCLLGVEQL DEHGQADEAV RRRDPDFLLM LRSPGKGSKL AVPRDPQQAL QRVPALSGAL LMMSRALFDR IGGWDAGYRL HAEDLDLCRR AREAGAVVAI ANDLQVTHVR GVSSRSRPFF VEWHKHKGLW RYFQKFEARQ RSLPVRVAVW GAIWAHALML VPKLLRKAL
|
| |